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BaseInfo

ncRNA ID	novel_osa_miR1086
Species	Oryza sativa
Class	miRNA
Genome position	Chr8:11753489-11753661 [+]
Reference genome	IRGSP-1.0
Source	SRR1742992
Length	24
Mature sequence(if miRNA)	1 - UAUUCACGUUCAACGUUUGAUCGU - 24
Stem-loop(if miRNA)	--     AC                                 UUUUG     UU   --------------AUUU     GCUAUUAAAUGAUA   UAUUC  GUUCAACGUUUGAUCGUUCGUCUUAUUUGAAAA     UAUGA  AGU                  UCAUU              A   |||||  |||||||||||||||||||||||||||||||||     |||||  |||                  |||||              A   AUAGG  CGGGUUGCAAACUGGCAGGCAGAAUAAAUUUUU     AUACU  UUA                  UGUAU              A CU     CA                                 --UAA     UU   AAUUUUUAUAAAUCAGUG     UUCAUGAUAAGUAC
Stem-loop sequence	UAUUCACGUUCAACGUUUGAUCGUUCGUCUUAUUUGAAAAUUUUGUAUGAUUAGUAUUUUCAUUGCUAUUAAAUGAUAAAACAUGAAUAGUACUUUAUGUGUGACUAAAUAUUUUUAAAUUUUUCAUAAAUUUUUUAAAUAAGACGGACGGUCAAACGUUGGGCACGGAUAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015788698.1	ncRNA:24   UGCUAGUUUGCAACUUGCACUUAU   1   |||||||||||||||||||||||| targets:44   ACGAUCAAACGUUGAACGUGAAUA   67 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group putative disease resistance protein RGA3 (LOC9266824), mRNA	putative disease resistance protein RGA3(LOC9266824)	coding protein	psRNATarget
CT828824.1	ncRNA:24   UGCUAGUUUGCAACUUGCACUUAU   1   |||=|||||||||||||||||||| targets:1223   ACGGUCAAACGUUGAACGUGAAUA   1246 Target Full Sequence	0.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA109D05, full insert sequence	NA	coding protein	psRNATarget
XM_015775993.1	ncRNA:24   UGCUAGUUUGCAACUUGCACUUAU   1   |||=|||||||||||||||||||| targets:2103   ACGGUCAAACGUUGAACGUGAAUA   2126 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group CBL-interacting protein kinase 10 (LOC4332786), transcript variant X2, mRNA	CBL-interacting protein kinase 10(LOC4332786)	coding protein	psRNATarget
XM_015775992.1	ncRNA:24   UGCUAGUUUGCAACUUGCACUUAU   1   |||=|||||||||||||||||||| targets:3057   ACGGUCAAACGUUGAACGUGAAUA   3080 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group CBL-interacting protein kinase 10 (LOC4332786), transcript variant X1, mRNA	CBL-interacting protein kinase 10(LOC4332786)	coding protein	psRNATarget
AK066541.1	ncRNA:24   UGCUAGUUUGCAACUUGCACUUAU   1   |||=|||||||||||||||||||| targets:3054   ACGGUCAAACGUUGAACGUGAAUA   3077 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J013070E20, full insert sequence	NA	coding protein	psRNATarget
XM_015787200.1	ncRNA:24   UGCUAGUUUGCAACUUGCACUUAU   1   |||=|||||=||||||=||||||| targets:64   ACGGUCAAAUGUUGAAUGUGAAUA   87 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group ras-related protein RABA3 (LOC4342063), transcript variant X2, mRNA	ras-related protein RABA3(LOC4342063)	coding protein	psRNATarget
XM_015787201.1	ncRNA:24   UGCUAGUUUGCAACUUGCACUUAU   1   |||=|||||=||||||=||||||| targets:64   ACGGUCAAAUGUUGAAUGUGAAUA   87 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group ras-related protein RABA3 (LOC4342063), transcript variant X3, mRNA	ras-related protein RABA3(LOC4342063)	coding protein	psRNATarget
AK064197.1	ncRNA:24   UGCUAGUUUGCAACUUGCACUUAU   1   ||||||||||*|||||=||||||| targets:1036   ACGAUCAAACAUUGAAUGUGAAUA   1059 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-104-D06, full insert sequence	NA	coding protein	psRNATarget