ncRNA ID | novel_osa_miR1083 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr8:2036949-2037070 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1742992;SRR1849765;SRR1849767;SRR1849769;SRR1849770;SRR1849773;SRR2040393;SRR2040395;SRR2040398;SRR2040400;SRR1298758;SRR1555749;SRR2040411;SRR2098557;SRR2098560;SRR2098822;SRR2098823;SRR2099428;SRR2099436;SRR2099568;SRR2099745;SRR2458631;SRR2857728;SRR2857730;SRR2857732;SRR2857733;SRR3123646;SRR3123650;SRR3123651;SRR3234040;SRR3234042;SRR3234045;SRR4407775;SRR4407779;SRR4407953;SRR4407954;SRR4407955;SRR4407957;SRR1556016;SRR4407958;SRR4407959;SRR4407960;SRR4407961;SRR5049784;SRR5049788;SRR5049789;SRR1298766;SRR1609313;SRR1654490;SRR1300837;SRR1738210;SRR1738212;SRR1738224;SRR1738228;SRR1738239;SRR1738240;SRR1738241 |
Length | 24 |
Mature sequence(if miRNA) | 99 - GUAAUAUACUAAUCCGUGCAUCCA - 122 |
Stem-loop(if miRNA) |
--         U          U   U        ------------UU     U   -      GUG   GUAAUAUAC AAUCCGUGCA CCA CGUAUAUC              ACACG CAU GUGAAC   C   ||||||||| |||||||||| ||| ||||||||              ||||| ||| ||||||   CGUUGUAUG UUGGGCACGU GGU GUGUAUGG              UGUGU GUA UACUUG   A GA         U          U   -        UAAUUGUAAAUAUU     U   A      GCU |
Stem-loop sequence | GUAAUAUACUAAUCCGUGCAUCCAUCGUAUAUCUUACACGUCAUGUGAACGUGCAUCGGUUCAUAAUGUUGUGUUUAUAAAUGUUAAUGGUAUGUGUGGUUGCACGGGUUUGUAUGUUGCAG |