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BaseInfo

ncRNA ID	novel_osa_miR1059
Species	Oryza sativa
Class	miRNA
Genome position	Chr5:27036317-27036388 [+]
Reference genome	IRGSP-1.0
Source	SRR1742992
Length	24
Mature sequence(if miRNA)	49 - CUGUCGAACUGUGGUUGUUCGAUA - 72
Stem-loop(if miRNA)	--         UG          U      UU UAU   UCGAACAAC  UAGUUUGACA GGUAUU  U   C   |||||||||  |||||||||| ||||||  |   AGCUUGUUG  GUCAAGCUGU CCAUAG  G   C AU         GU          C      CU UCC
Stem-loop sequence	UCGAACAACUGUAGUUUGACAUGGUAUUUUUUAUCCCCUGUCGAUACCCUGUCGAACUGUGGUUGUUCGAUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK070057.1	ncRNA:24   AUAGCUUGUUGGUGUCAAGCUGUC   1   |||||||||||||||||||||=|| targets:1712   UAUCGAACAACCACAGUUCGAUAG   1735 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023041K22, full insert sequence	NA	coding protein	psRNATarget
AK288371.1	ncRNA:24   AUAGCUUGUUGGUGUCAAGCUGUC   1   |=|||||||||||||||||||||| targets:109   UGUCGAACAACCACAGUUCGACAG   132 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090026F03, full insert sequence	NA	coding protein	psRNATarget
AK288371.1	ncRNA:24   AUAGCUUGUUGGUGUCAAGCUGUC   1   |=||||||||||=||||||||||| targets:349   UGUCGAACAACCGCAGUUCGACAG   372 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090026F03, full insert sequence	NA	coding protein	psRNATarget
AK288290.1	ncRNA:24   AUAGCUUGUUGGUGUCAAGCUGUC   1   |=|=||||||||=||||||||||| targets:2065   UGUUGAACAACCGCAGUUCGACAG   2088 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090019D06, full insert sequence	NA	coding protein	psRNATarget