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BaseInfo

ncRNA ID novel_osa_miR1055
Species Oryza sativa
Class miRNA
Genome position Chr5:3662156-3662209 [-]
Reference genome IRGSP-1.0
Source SRR1742992
Length 20
Mature sequence(if miRNA) 1 - ACCUAGUUUCUGCCACAAGA - 20
Stem-loop(if miRNA) --     A       CGU    CGAGU
  UUGUG CAGAAAC   GUAG     U
  ||||| |||||||   ||||
  AACAC GUCUUUG   CAUC     C
AG     C       AUC    AACCA
Stem-loop sequence UUGUGACAGAAACCGUGUAGCGAGUUCACCAACUACCUAGUUUCUGCCACAAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015767700.1
ncRNA:20   AGAACACCGUCUUUGAUCCA   1
  |*||||*||||||||||||*
targets:868   UAUUGUUGCAGAAACUAGGC   887

3.0 PREDICTED: Oryza sativa Japonica Group isoleucine--tRNA ligase, cytoplasmic (LOC9272464), mRNA isoleucine--tRNA ligase, cytoplasmic(LOC9272464) coding protein psRNATarget