ncRNA ID | novel_osa_miR1055 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr5:3662156-3662209 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1742992 |
Length | 20 |
Mature sequence(if miRNA) | 1 - ACCUAGUUUCUGCCACAAGA - 20 |
Stem-loop(if miRNA) |
--     A       CGU    CGAGU   UUGUG CAGAAAC   GUAG     U   ||||| |||||||   ||||   AACAC GUCUUUG   CAUC     C AG     C       AUC    AACCA |
Stem-loop sequence | UUGUGACAGAAACCGUGUAGCGAGUUCACCAACUACCUAGUUUCUGCCACAAGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015767700.1 |
|
3.0 | PREDICTED: Oryza sativa Japonica Group isoleucine--tRNA ligase, cytoplasmic (LOC9272464), mRNA | isoleucine--tRNA ligase, cytoplasmic(LOC9272464) | coding protein | psRNATarget |