ncRNA ID | novel_osa_miR1053 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:20034263-20034385 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1742992;SRR1738221;SRR1738224 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CACCGAGAACGGUCACAUGAGCUC - 24 |
Stem-loop(if miRNA) |
--    -   -   -        C  CAUC      U   -      AAAC     CGGU   - G   GUUC UGU ACU UUCUCGGU GA    AGAGAU GAC UUAGAC    CCUUU    GCC C C   |||| ||| ||| |||||||| ||    |||||| ||| ||||||    |||||    ||| |   CGAG ACA UGG AAGAGCCA CU    UCUCUA UUG AAUCUG    GGAAA    CGG G A CU    U   C   C        -  CAAA      -   C      --AA     UAAU   A C |
Stem-loop sequence | GUUCUGUACUUUCUCGGUCGACAUCAGAGAUUGACUUAGACAAACCCUUUCGGUGCCCGCACGAGGCUAAUAAAGGAAGUCUAACGUUAUCUCUAAACUCACCGAGAACGGUCACAUGAGCUC |