ncRNA ID | novel_osa_miR1052 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:23857997-23858109 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1742992 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUUUAGUCCCUGAAUCCAAACAC - 24 |
Stem-loop(if miRNA) |
--        C  A             AUCCC      -AUUGG        AC   AA   GUUUGGAU CA GGACUAAAUUUUA     UGUCAU      AUGUUUGG  ACU  U   |||||||| || |||||||||||||     ||||||      ||||||||  |||  U   CAAACCUA GU CCUGAUUUAAAAU     ACAGUA      UGCAAAUU  UGA  A CA        A  C             ----C      AUCAGA        -A   AG |
Stem-loop sequence | GUUUGGAUCCAAGGACUAAAUUUUAAUCCCUGUCAUAUUGGAUGUUUGGACACUAAUUAGAAGUAUUAAACGUAGACUAAUGACACUAAAAUUUAGUCCCUGAAUCCAAACAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288793.1 |
|
1.0 | Oryza sativa Japonica Group cDNA, clone: J090070C08, full insert sequence | NA | coding protein | psRNATarget |