ncRNA ID | novel_osa_miR1049 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr7:5276020-5276133 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1555746;SRR1556014 |
Length | 24 |
Mature sequence(if miRNA) | 91 - AAUGUUAGUAACACUUUGUCGGAU - 114 |
Stem-loop(if miRNA) |
--    A      A  G                       UAUCUCUCAUC     U   CCGA AAAGUG UA UAACAUUGUUCACAAAAUUCACA           UGGUU A   |||| |||||| || |||||||||||||||||||||||           |||||   GGCU UUUCAC AU AUUGUAACAAGUGUUUUAAGUGU           AUCAA U UA    G      A  G                       UUAUACACAAU     A |
Stem-loop sequence | CCGAAAAAGUGAUAGUAACAUUGUUCACAAAAUUCACAUAUCUCUCAUCUGGUUUAUAAACUAUAACACAUAUUUGUGAAUUUUGUGAACAAUGUUAGUAACACUUUGUCGGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015768274.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group early nodulin-75 (LOC4330498), mRNA | early nodulin-75(LOC4330498) | coding protein | psRNATarget |