ncRNA ID | novel_osa_miR1042 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:205942-206060 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1742992;SRR1742993;SRR1738214;SRR1738221 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CACCGAGAACGGUCACAUGAGCUC - 24 |
Stem-loop(if miRNA) |
--    -   --  U        U  CA        ------C    AAA    A  GGU   - G   GCUC UGU  UC UUCUUGGU GA  UCGGAGAU       AGAC   CCCU UA   GCC C C   |||| |||  || |||||||| ||  ||||||||       ||||   |||| ||   ||| |   CGAG ACA  GG AAGAGCCA CU  AGUCUCUA       UCUG   GGGA AU   CGG G A CU    U   CU  C        -  CA        UUGCAAA    -AA    -  AGU   A C |
Stem-loop sequence | GCUCUGUUCUUUCUUGGUUGACAUCGGAGAUCAGACAAACCCUAUAGGUGCCCGCACGAGGCUGAUAAGGGAAGUCUAAACGUUAUCUCUGAACUCACCGAGAACGGUCACAUGAGCUC |