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BaseInfo

ncRNA ID novel_osa_miR1042
Species Oryza sativa
Class miRNA
Genome position Chr4:205942-206060 [-]
Reference genome IRGSP-1.0
Source SRR1742992;SRR1742993;SRR1738214;SRR1738221
Length 24
Mature sequence(if miRNA) 1 - CACCGAGAACGGUCACAUGAGCUC - 24
Stem-loop(if miRNA) --    -   --  U        U  CA        ------C    AAA    A  GGU   - G
  GCUC UGU  UC UUCUUGGU GA  UCGGAGAU       AGAC   CCCU UA   GCC C C
  |||| |||  || |||||||| ||  ||||||||       ||||   |||| ||   ||| |
  CGAG ACA  GG AAGAGCCA CU  AGUCUCUA       UCUG   GGGA AU   CGG G A
CU    U   CU  C        -  CA        UUGCAAA    -AA    -  AGU   A C
Stem-loop sequence GCUCUGUUCUUUCUUGGUUGACAUCGGAGAUCAGACAAACCCUAUAGGUGCCCGCACGAGGCUGAUAAGGGAAGUCUAAACGUUAUCUCUGAACUCACCGAGAACGGUCACAUGAGCUC