ncRNA ID | novel_osa_miR1039 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:12430897-12430940 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1742992 |
Length | 21 |
Mature sequence(if miRNA) | 24 - UUUUGGAUCAUACUAUGAGCU - 44 |
Stem-loop(if miRNA) |
---         AUA      GC    UUUUGGAUC   CUAUGA  U    |||||||||   ||||||  U    AAAAUCUAG   GAUACU  U AUA         --A      AA |
Stem-loop sequence | UUUUGGAUCAUACUAUGAGCUUUAAUCAUAGAGAUCUAAAAAUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK318524.1 |
|
1.5 | Oryza sativa Japonica Group cDNA, clone: J065057P07, full insert sequence | NA | coding protein | psRNATarget |