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BaseInfo

ncRNA ID novel_osa_miR1039
Species Oryza sativa
Class miRNA
Genome position Chr4:12430897-12430940 [-]
Reference genome IRGSP-1.0
Source SRR1742992
Length 21
Mature sequence(if miRNA) 24 - UUUUGGAUCAUACUAUGAGCU - 44
Stem-loop(if miRNA) ---         AUA      GC
   UUUUGGAUC   CUAUGA  U
   |||||||||   ||||||  U
   AAAAUCUAG   GAUACU  U
AUA         --A      AA
Stem-loop sequence UUUUGGAUCAUACUAUGAGCUUUAAUCAUAGAGAUCUAAAAAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK318524.1
ncRNA:21   UCGAGUAUCAUACUAGGUUUU   1
  |||||||||||*|||||||||
targets:3945   AGCUCAUAGUACGAUCCAAAA   3965

1.5 Oryza sativa Japonica Group cDNA, clone: J065057P07, full insert sequence NA coding protein psRNATarget