ncRNA ID | novel_osa_miR1038 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr7:11568029-11568195 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1555746;SRR1556014 |
Length | 21 |
Mature sequence(if miRNA) | 147 - UUUGGGCACACGUUUGAGCAU - 167 |
Stem-loop(if miRNA) |
--        C        G  U          A     AC  -         -  --UU    UU  UG  A    UUU    AU   UUUGGGCA ACGUUUGA CA UCAUCUUAUU AAAAA  UA UGUAAGUAU CA    UAUU  GU  UG UUUG   UAUC  C   |||||||| |||||||| || |||||||||| |||||  || ||||||||| ||    ||||  ||  || ||||   ||||   AAACCUGU UGCAAACU GU AGUAGAAUAA UUUUU  AU ACGUUUAUA GU    AUAA  CA  AC GAAU   AUAG  A GA        A        G  U          A     AA  C         C  UUUU    UU  GU  -    UUC    AA |
Stem-loop sequence | UUUGGGCACACGUUUGAGCAUUCAUCUUAUUAAAAAAACUAUGUAAGUAUCAUUUAUUUUGUUGUGAUUUGUUUUAUCAUCAAAGAUACUUUAAGCAUGACUUAAUAUUUUUGCAUAUUUGCACUAAAUUUUUAAAUAAGAUGAUUGGUCAAACGUAUGUCCAAAAG |