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BaseInfo

ncRNA ID novel_osa_miR1038
Species Oryza sativa
Class miRNA
Genome position Chr7:11568029-11568195 [-]
Reference genome IRGSP-1.0
Source SRR1555746;SRR1556014
Length 21
Mature sequence(if miRNA) 147 - UUUGGGCACACGUUUGAGCAU - 167
Stem-loop(if miRNA) --        C        G  U          A     AC  -         -  --UU    UU  UG  A    UUU    AU
  UUUGGGCA ACGUUUGA CA UCAUCUUAUU AAAAA  UA UGUAAGUAU CA    UAUU  GU  UG UUUG   UAUC  C
  |||||||| |||||||| || |||||||||| |||||  || ||||||||| ||    ||||  ||  || ||||   ||||
  AAACCUGU UGCAAACU GU AGUAGAAUAA UUUUU  AU ACGUUUAUA GU    AUAA  CA  AC GAAU   AUAG  A
GA        A        G  U          A     AA  C         C  UUUU    UU  GU  -    UUC    AA
Stem-loop sequence UUUGGGCACACGUUUGAGCAUUCAUCUUAUUAAAAAAACUAUGUAAGUAUCAUUUAUUUUGUUGUGAUUUGUUUUAUCAUCAAAGAUACUUUAAGCAUGACUUAAUAUUUUUGCAUAUUUGCACUAAAUUUUUAAAUAAGAUGAUUGGUCAAACGUAUGUCCAAAAG