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BaseInfo

ncRNA ID novel_osa_miR1025
Species Oryza sativa
Class miRNA
Genome position Chr2:26009571-26009623 [+]
Reference genome IRGSP-1.0
Source SRR1742992
Length 24
Mature sequence(if miRNA) 30 - CACGCCUGCGAAAAUGUCGUUGGG - 53
Stem-loop(if miRNA) --   A C              GA C
  CGA G UAUUUUCGCAGGCG  C U
  ||| | ||||||||||||||  | G
  GUU C GUAAAAGCGUCCGC  G U
GG   G U              AC U
Stem-loop sequence CGAAGCUAUUUUCGCAGGCGGACCUGUUGCACGCCUGCGAAAAUGUCGUUGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK121178.1
ncRNA:24   GGGUUGCUGUAAAAGCGUCCGCAC   1
  *||--|||||||||||||||||*|
targets:1789   ACC--CGACAUUUUCGCAGGCGGG   1810

1.5 Oryza sativa Japonica Group cDNA clone:J023083G22, full insert sequence NA coding protein psRNATarget