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BaseInfo

ncRNA ID novel_osa_miR1021
Species Oryza sativa
Class miRNA
Genome position Chr2:8152967-8153089 [+]
Reference genome IRGSP-1.0
Source SRR1742992;SRR1742993;SRR1738214;SRR1738221
Length 24
Mature sequence(if miRNA) 100 - CACCGAGAACGGUCACAUGAGCUC - 123
Stem-loop(if miRNA) --    -  -C   -        U  CG          ACUC    AAAC      GGU    G
  GCUC UG  ACU UUCUUGGU GA  UCGGAGAUGG    AGAC    CCUUUA   GCCU C
  |||| ||  ||| |||||||| ||  ||||||||||    ||||    ||||||   |||| A
  CGAG AC  UGG AAGAGCCA CU  AGUCUCUAUU    UCUG    GGAAAU   CGGA C
CU    U  AC   C        -  CA          GCAA    --AA      AGU    G
Stem-loop sequence GCUCUGCACUUUCUUGGUUGACGUCGGAGAUGGACUCAGACAAACCCUUUAGGUGCCUGCACGAGGCUGAUAAAGGAAGUCUAACGUUAUCUCUGAACUCACCGAGAACGGUCACAUGAGCUC