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BaseInfo

ncRNA ID	novel_osa_miR1015
Species	Oryza sativa
Class	miRNA
Genome position	Chr10:14483302-14483378 [-]
Reference genome	IRGSP-1.0
Source	SRR1742992;SRR1555749;SRR2097778;SRR2098557;SRR1555751;SRR2099746;SRR1556011;SRR3085192;SRR3123645;SRR3123646;SRR3123651;SRR3234040;SRR3234045;SRR4407953;SRR4407956;SRR4407957;SRR1556016;SRR4407962;SRR1556018;SRR1654490;SRR1654491;SRR1738210;SRR1738226;SRR1738228;SRR1738240
Length	22
Mature sequence(if miRNA)	1 - UCGGACCAGGCUUCAUUCCCCU - 22
Stem-loop(if miRNA)	--A      UC      C          A    A   GU    GGAAUG  GUCUGG CUGAGAUCGU CCAC GUG  G    ||||||  |||||| |||||||||| |||| |||  G    CCUUAC  CGGACC GGCUCUGGCA GGUG CAC  G UCC      UU      A          -    -   AU
Stem-loop sequence	AGGAAUGUCGUCUGGCCUGAGAUCGUACCACAGUGGUGGGUACACGUGGACGGUCUCGGACCAGGCUUCAUUCCCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AB374207.1	ncRNA:22   UCCCCUUACUUCGGACCAGGCU   1   ***||=|||||||||||||||= targets:833   CCUGGGAUGAAGCCUGGUCCGG   854 Target Full Sequence	2.0	Oryza sativa Japonica Group OSHB5 mRNA for class III homeodomain-leucine zipper protein, complete cds	NA	coding protein	psRNATarget
XM_015777224.1	ncRNA:22   UCCCCUUACUUCGGACCAGGCU   1   ***||=|||||||||||||||= targets:714   CCUGGGAUGAAGCCUGGUCCGG   735 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group homeobox-leucine zipper protein HOX10 (LOC4331345), transcript variant X2, mRNA	homeobox-leucine zipper protein HOX10(LOC4331345)	coding protein	psRNATarget
AK102830.1	ncRNA:22   UCCCCUUACUUCGGACCAGGCU   1   ***||=|||||||||||||||= targets:696   CCUGGGAUGAAGCCUGGUCCGG   717 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J033109G06, full insert sequence	NA	coding protein	psRNATarget
XM_015769204.1	ncRNA:22   UCCCCUUACUUCGGACCAGGCU   1   ***||=|||||||||||||||= targets:833   CCUGGGAUGAAGCCUGGUCCGG   854 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group homeobox-leucine zipper protein HOX29 (LOC4327348), mRNA	homeobox-leucine zipper protein HOX29(LOC4327348)	coding protein	psRNATarget
AY423716.1	ncRNA:22   UCCCCUUACUUCGGACCAGGCU   1   ***||=|||||||||||||||= targets:849   CCUGGGAUGAAGCCUGGUCCGG   870 Target Full Sequence	2.0	Oryza sativa (japonica cultivar-group) homeodomain leucine-zipper protein Hox9 mRNA, complete cds	NA	coding protein	psRNATarget
AK102603.1	ncRNA:22   UCCCCUUACUUCGGACCAGGCU   1   ***||=|||||||||||||||= targets:920   CCUGGGAUGAAGCCUGGUCCGG   941 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J033098N12, full insert sequence	NA	coding protein	psRNATarget
AY425991.1	ncRNA:22   UCCCCUUACUUCGGACCAGGCU   1   ***||=|||||||||||||||= targets:972   CCUGGGAUGAAGCCUGGUCCGG   993 Target Full Sequence	2.0	Oryza sativa (japonica cultivar-group) homeodomain leucine-zipper protein Hox10 mRNA, complete cds	NA	coding protein	psRNATarget
AK102378.1	ncRNA:22   UCCCCUUACUUCGGACCAGGCU   1   ***||=|||||||||||||||= targets:972   CCUGGGAUGAAGCCUGGUCCGG   993 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J033091P14, full insert sequence	NA	coding protein	psRNATarget
XM_015777223.1	ncRNA:22   UCCCCUUACUUCGGACCAGGCU   1   ***||=|||||||||||||||= targets:978   CCUGGGAUGAAGCCUGGUCCGG   999 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group homeobox-leucine zipper protein HOX10 (LOC4331345), transcript variant X1, mRNA	homeobox-leucine zipper protein HOX10(LOC4331345)	coding protein	psRNATarget
XM_015759415.1	ncRNA:22   UCCCCUUACUUCGGACCAGGCU   1   ***||=|||||||||||||||= targets:980   CCUGGGAUGAAGCCUGGUCCGG   1001 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group homeobox-leucine zipper protein HOX9 (LOC4348919), mRNA	homeobox-leucine zipper protein HOX9(LOC4348919)	coding protein	psRNATarget
AK288397.1	ncRNA:22   UCCCCUUACUUCGGACCAGGCU   1   *|*|||||||||||||*||||| targets:1244   UGAGGAAUGAAGCCUGAUCCGA   1265 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090028B18, full insert sequence	NA	coding protein	psRNATarget
XM_015768343.1	ncRNA:22   UCCCCUUACUUCGGACCAGGCU   1   *||*|||*|||||||||||||* targets:359   CGGUGAAGGAAGCCUGGUCCGU   380 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group protein DETOXIFICATION 49 (LOC4330303), mRNA	protein DETOXIFICATION 49(LOC4330303)	coding protein	psRNATarget
XM_015778639.1	ncRNA:22   UCCCCUUACUUCGGACCAGGCU   1   *||*|||*|||||||||||||* targets:393   CGGUGAACGAAGCCUGGUCCGU   414 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group protein DETOXIFICATION 49 (LOC4336717), mRNA	protein DETOXIFICATION 49(LOC4336717)	coding protein	psRNATarget
AK241934.1	ncRNA:22   UCCCCUUACUUCGGACCAGGCU   1   *||*|||*|||||||||||||* targets:400   CGGUGAACGAAGCCUGGUCCGU   421 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J075082P08, full insert sequence	NA	coding protein	psRNATarget