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BaseInfo

ncRNA ID	novel_osa_miR1012
Species	Oryza sativa
Class	miRNA
Genome position	Chr7:20247536-20247621 [-]
Reference genome	IRGSP-1.0
Source	SRR1555746;SRR1298758;SRR1556014;SRR4407956;SRR1654490;SRR1300837
Length	24
Mature sequence(if miRNA)	63 - AAUAAAAACCAGGGCUAAAGAUGA - 86
Stem-loop(if miRNA)	--    A     A           G UCUU  GU    -GU  A   AAUA AAACC GGGCUAAAGAU A    UA  CCCG   UC A   |||| ||||| ||||||||||| |    ||  ||||   || A   UUGU UUUGG CCUGAUUUCUA U    AU  GGGC   GG A CA    G     C           G --UU  AC    AAU  G
Stem-loop sequence	AAUAAAAACCAGGGCUAAAGAUGAUCUUUAGUCCCGGUUCAAAAGGGUAACGGGCAUAUUUGAUCUUUAGUCCCGGUUUGUGUUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288734.1	ncRNA:24   AGUAGAAAUCGGGACCAAAAAUAA   1   |||||||||||||*|||||||||| targets:88   UCAUCUUUAGCCCCGGUUUUUAUU   111 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090063I24, full insert sequence	NA	coding protein	psRNATarget
AK288598.1	ncRNA:24   AGUAGAAAUCGGGACCAAAAAUAA   1   |||||||||||||*|||||||||| targets:1099   UCAUCUUUAGCCCCGGUUUUUAUU   1122 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090051P05, full insert sequence	NA	coding protein	psRNATarget
HI403889.1	ncRNA:24   AGUAGAAAUCGGGACCAAAAAUAA   1   *|||||||||=|=||||||||||| targets:29   ACAUCUUUAGUCUUGGUUUUUAUU   52 Target Full Sequence	2.5	Sequence 2014 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236019.1	ncRNA:24   AGUAGAAAUCGGGACCAAAAAUAA   1   *|||||||||=|=||||||||||| targets:29   ACAUCUUUAGUCUUGGUUUUUAUU   52 Target Full Sequence	2.5	Sequence 2014 from Patent EP2985353	NA	coding protein	psRNATarget
JB164350.1	ncRNA:24   AGUAGAAAUCGGGACCAAAAAUAA   1   *|||||||||=|=||||||||||| targets:29   ACAUCUUUAGUCUUGGUUUUUAUU   52 Target Full Sequence	2.5	Sequence 2014 from Patent EP2559767	NA	coding protein	psRNATarget
AK287459.1	ncRNA:24   AGUAGAAAUCGGGACCAAAAAUAA   1   *=||*|||||=|=||||||||||| targets:3435   AUAUAUUUAGUCUUGGUUUUUAUU   3458 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J043019O07, full insert sequence	NA	coding protein	psRNATarget
AK289098.1	ncRNA:24   AGUAGAAAUCGGGACCAAAAAUAA   1   *=||=|||||=|||||||||||*| targets:317   AUAUUUUUAGUCCUGGUUUUUAAU   340 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK288424.1	ncRNA:24   AGUAGAAAUCGGGACCAAAAAUAA   1   |**|=|||||=||*|||||||||| targets:2461   UGCUUUUUAGUCCCGGUUUUUAUU   2484 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget