| ncRNA ID | novel_osa_miR998 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr1:6677577-6677753 [-] |
| Reference genome | IRGSP-1.0 |
| Source | SRR1742992;SRR1609316;SRR1738210 |
| Length | 21 |
| Mature sequence(if miRNA) | 1 - UUGGACUGAAGGGUGCUCCCU - 21 |
| Stem-loop(if miRNA) |
-GA GU CU U UA - -- G G AC C CA C AAGAAA UG GAGC CCUUCAGUCCA CA GGGCGGUGC GGGUCG AAU UA CU CCG UCAUUCAC CA UGC AAGC CGCU A |||| ||||||||||| || ||||||||| |||||| ||| || || ||| |||||||| || ||| |||| |||| CUCG GGAAGUCAGGU GU UCUGCCGCG UCUAGC UUG AU GA GGC AGUAAGUG GU ACG UUCG GCGA G UCC UG UC U -C C CA G G GA A AG A ----AA UA |
| Stem-loop sequence | GAGAGCGUCCUUCAGUCCACUCAUGGGCGGUGCUAGGGUCGAAUUAGCUGCCGACUCAUUCACCCACAUGCCAAGCAAGAAACGCUUGAGAUAGCGAAGCUUAGCAGAUGAGUGAAUGAAGCGGGAGGUAACGUUCCGAUCUCGCGCCGUCUUUGCUUGGACUGAAGGGUGCUCCCU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK106830.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:002-116-F07, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| AB071808.1 |
|
2.5 | Oryza sativa Japonica Group mRNA for transcription factor PCF8, partial cds | NA | coding protein | psRNATarget | |||||||||
| XM_015763846.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group transcription factor PCF8 (LOC4352799), mRNA | transcription factor PCF8(LOC4352799) | coding protein | psRNATarget |