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BaseInfo

ncRNA ID novel_osa_miR995
Species Oryza sativa
Class miRNA
Genome position Chr1:10132735-10132850 [-]
Reference genome IRGSP-1.0
Source SRR1742992;SRR1743002;SRR2097779
Length 24
Mature sequence(if miRNA) 93 - UCACGAGACGGAUCUUUUGAGCCU - 116
Stem-loop(if miRNA) --  A      G            CUAGC            G      -    A U    
  UC CGAGAC GAUCUUUUGAGC     UAACUAGUCCAU AUUAGC CAUA G GUUAC
  || |||||| ||||||||||||     |||||||||||| |||||| |||| | ||||A
  GG GCUCUG UUAGAAAACUCG     AUUGAUUAGGUG UAAUCG GUAU C CAAUG
UU  C      A            ----U            G      U    A U    
Stem-loop sequence UCACGAGACGGAUCUUUUGAGCCUAGCUAACUAGUCCAUGAUUAGCCAUAAGUGUUACAGUAACUCAUAUGUGCUAAUGGUGGAUUAGUUAUGCUCAAAAGAUUAGUCUCGCGGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK121199.1
ncRNA:24   UCCGAGUUUUCUAGGCAGAGCACU   1
  |||||||||||||=|||||||||=
targets:1468   AGGCUCAAAAGAUUCGUCUCGUGG   1491

2.5 Oryza sativa Japonica Group cDNA clone:J023087G06, full insert sequence NA coding protein psRNATarget