ncRNA ID | novel_osa_miR995 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr1:10132735-10132850 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1742992;SRR1743002;SRR2097779 |
Length | 24 |
Mature sequence(if miRNA) | 93 - UCACGAGACGGAUCUUUUGAGCCU - 116 |
Stem-loop(if miRNA) |
--  A      G            CUAGC            G      -    A U       UC CGAGAC GAUCUUUUGAGC     UAACUAGUCCAU AUUAGC CAUA G GUUAC   || |||||| ||||||||||||     |||||||||||| |||||| |||| | ||||A   GG GCUCUG UUAGAAAACUCG     AUUGAUUAGGUG UAAUCG GUAU C CAAUG UU  C      A            ----U            G      U    A U     |
Stem-loop sequence | UCACGAGACGGAUCUUUUGAGCCUAGCUAACUAGUCCAUGAUUAGCCAUAAGUGUUACAGUAACUCAUAUGUGCUAAUGGUGGAUUAGUUAUGCUCAAAAGAUUAGUCUCGCGGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK121199.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J023087G06, full insert sequence | NA | coding protein | psRNATarget |