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BaseInfo

ncRNA ID	novel_osa_miR991
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:20908532-20908593 [+]
Reference genome	IRGSP-1.0
Source	SRR1742992
Length	22
Mature sequence(if miRNA)	41 - GUUAUCCUAACGAGCUUGACCG - 62
Stem-loop(if miRNA)	--U  U         C     UG   CG       UC AGCUCGUUA GAUAA  AGC  AGCC    || ||||||||| |||||  |||  |||G    AG UCGAGCAAU CUAUU  UCG  UCGA GCC  U         C     GU   -A
Stem-loop sequence	UUCUAGCUCGUUACGAUAAUGAGCCGAGCCGAGCUAGCUUGUUAUCCUAACGAGCUUGACCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015779748.1	ncRNA:22   GCCAGUUCGAGCAAUCCUAUUG   1   ||||*||||||||||||||||| targets:238   CGGUAAAGCUCGUUAGGAUAAC   259 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group cyclic dof factor 2 (LOC4324267), mRNA	cyclic dof factor 2(LOC4324267)	coding protein	psRNATarget
AK288737.1	ncRNA:22   GCCAGUUCGAGCAAUCCUAUUG   1   |||||*|||||*|||||||||| targets:1913   CGGUCUAGCUCAUUAGGAUAAC   1934 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090063M20, full insert sequence	NA	coding protein	psRNATarget
XM_015793085.1	ncRNA:22   GCCAGUUCGAGCAAUCCUAUUG   1   |*||=*|||||||||||||||| targets:552   CAGUUUAGCUCGUUAGGAUAAC   573 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107281835 (LOC107281835), transcript variant X1, mRNA	uncharacterized LOC107281835(LOC107281835)	coding protein	psRNATarget
XM_015793088.1	ncRNA:22   GCCAGUUCGAGCAAUCCUAUUG   1   |*||=*|||||||||||||||| targets:564   CAGUUUAGCUCGUUAGGAUAAC   585 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107281835 (LOC107281835), transcript variant X3, mRNA	uncharacterized LOC107281835(LOC107281835)	coding protein	psRNATarget
AK109175.1	ncRNA:22   GCCAGUUCGAGCAAUCCUAUUG   1   |**|=*|||||||||||||||| targets:554   CCUUUUAGCUCGUUAGGAUAAC   575 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:002-155-H10, full insert sequence	NA	coding protein	psRNATarget
XM_015757797.1	ncRNA:22   GCCAGUUCGAGCAAUCCUAUUG   1   |**|=*|||||||||||||||| targets:533   CCUUUUAGCUCGUUAGGAUAAC   554 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group wall-associated receptor kinase 1 (LOC4347988), transcript variant X1, mRNA	wall-associated receptor kinase 1(LOC4347988)	coding protein	psRNATarget
XM_015771083.1	ncRNA:22   GCCAGUUCGAGCAAUCCUAUUG   1   =**||*||||||||||*||||| targets:181   UCUUCUAGCUCGUUAGAAUAAC   202 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probable purine permease 11 (LOC4330368), transcript variant X1, mRNA	probable purine permease 11(LOC4330368)	coding protein	psRNATarget
AK065336.1	ncRNA:22   GCCAGUUCGAGCAAUCCUAUUG   1   =**||*||||||||||*||||| targets:553   UCUUCUAGCUCGUUAGAAUAAC   574 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013000O22, full insert sequence	NA	coding protein	psRNATarget