ncRNA ID | novel_osa_miR988 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr1:15695319-15695372 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1742992 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AACCGGGACUAAAGUUAUGAUCUU - 24 |
Stem-loop(if miRNA) |
--  -  AGU              U U   GA CA   CUUUAGUCCUGGUU G A   || ||   |||||||||||||| | A   CU GU   GAAAUCAGGGCCAA C C UU  A  AUU              C A |
Stem-loop sequence | GACAAGUCUUUAGUCCUGGUUUGUAACACCAACCGGGACUAAAGUUAUGAUCUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288438.1 |
|
3.0 | Oryza sativa Japonica Group cDNA, clone: J090034C21, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK065811.1 |
|
3.0 | Oryza sativa Japonica Group cDNA clone:J013039F07, full insert sequence | NA | coding protein | psRNATarget |