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BaseInfo

ncRNA ID	novel_osa_miR987
Species	Oryza sativa
Class	miRNA
Genome position	Chr10:15490954-15491074 [+]
Reference genome	IRGSP-1.0
Source	SRR1742992;SRR5049787;SRR5351739;SRR1738212;SRR1738214
Length	23
Mature sequence(if miRNA)	99 - UUUUGGCACCGUAUUACUUUUCU - 121
Stem-loop(if miRNA)	--        -    GC  G       ----CGAAACUUCUAAU      UCCAUCGCCCUAGC   AAAGGUAA ACGG  UG CAAAAAU                 GGGCGA              G   |||||||| ||||  || |||||||                 ||||||   UUUUCAUU UGCC  AC GUUUUUA                 CGCUGG              A UC        A    --  G       UUACACCCCCUCUCCUC      ACUAGCGAUGGGCU
Stem-loop sequence	AAAGGUAAACGGGCUGGCAAAAAUCGAAACUUCUAAUGGGCGAUCCAUCGCCCUAGCGAUCGGGUAGCGAUCAGGUCGCCUCCUCUCCCCCACAUUAUUUUUGGCACCGUAUUACUUUUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015787814.1	ncRNA:23   UCUUUUCAUUAUGCCACGGUUUU   1   ||=|||||||||||||||||||| targets:143   AGGAAAGUAAUACGGUGCCAAAA   165 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group shikimate O-hydroxycinnamoyltransferase (LOC4340333), mRNA	shikimate O-hydroxycinnamoyltransferase(LOC4340333)	coding protein	psRNATarget
AK288253.1	ncRNA:23   UCUUUUCAUUAUGCCACGGUUUU   1   ||=||||||||=||||||||||| targets:2461   AGGAAAGUAAUGCGGUGCCAAAA   2483 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090015J01, full insert sequence	NA	coding protein	psRNATarget
CT837773.1	ncRNA:23   UCUUUUCAUUAUGCCACGGUUUU   1   *||||||||||=||||||||||| targets:181   UGAAAAGUAAUGCGGUGCCAAAA   203 Target Full Sequence	1.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN071M04, full insert sequence	NA	coding protein	psRNATarget
AK288182.1	ncRNA:23   UCUUUUCAUUAUGCCACGGUUUU   1   ||=|||*|||||||||||||||| targets:501   AGGAAAAUAAUACGGUGCCAAAA   523 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090005J12, full insert sequence	NA	coding protein	psRNATarget