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BaseInfo

ncRNA ID	novel_osa_miR984
Species	Oryza sativa
Class	miRNA
Genome position	Chr6:25891141-25891222 [+]
Reference genome	IRGSP-1.0
Source	SRR1555746;SRR2857733;SRR1556014;SRR5351740
Length	21
Mature sequence(if miRNA)	1 - CGAUAUUGGUGAGGUUCAAUC - 21
Stem-loop(if miRNA)	--C          A         C   G           AG    GAUAUUGGUG GGUUCAAUC GAU AUUGGUUUUAC  C    |||||||||| ||||||||| ||| |||||||||||  A    CUAUAACCGC CCGAGUUAG CUA UGACUAAAAUG  G UCU          G         U   -           GU
Stem-loop sequence	CGAUAUUGGUGAGGUUCAAUCCGAUGAUUGGUUUUACAGCAGUGGUAAAAUCAGUAUCUGAUUGAGCCGCGCCAAUAUCUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015759644.1	ncRNA:21   CUAACUUGGAGUGGUUAUAGC   1   ||*|||*|||||||||||||* targets:768   GAGUGAUCCUCACCAAUAUCA   788 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group short-chain dehydrogenase TIC 32, chloroplastic (LOC4349944), mRNA	short-chain dehydrogenase TIC 32, chloroplastic(LOC4349944)	coding protein	psRNATarget
AK062546.1	ncRNA:21   CUAACUUGGAGUGGUUAUAGC   1   ||*|||*|||||||||||||* targets:740   GAGUGAUCCUCACCAAUAUCA   760 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:001-104-G08, full insert sequence	NA	coding protein	psRNATarget
CT829986.1	ncRNA:21   CUAACUUGGAGUGGUUAUAGC   1   ||*|||*|||||||||||||* targets:743   GAGUGAUCCUCACCAAUAUCA   763 Target Full Sequence	3.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA002B17, full insert sequence	NA	coding protein	psRNATarget
AK065928.1	ncRNA:21   CUAACUUGGAGUGGUUAUAGC   1   ||*|||*|||||||||||||* targets:1656   GAGUGAUCCUCACCAAUAUCA   1676 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:J013044J03, full insert sequence	NA	coding protein	psRNATarget