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BaseInfo

ncRNA ID	novel_osa_miR982
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:7146045-7146177 [+]
Reference genome	IRGSP-1.0
Source	SRR1742991;SRR1742995;SRR2857735;SRR5049787
Length	24
Mature sequence(if miRNA)	1 - ACUGAACUUAGACACCUCAGCGCC - 24
Stem-loop(if miRNA)	--A     C                  AAUA  A             -AC  UG CACGCUGACUCAG    CUGAA UUAGACACCUCAGCGCCA    GC UGGCGCUGAAUGU   GU  G             C    ||||| ||||||||||||||||||    || |||||||||||||   ||  |    GACUU AAUCUGUGGAGUCGCGGU    UG ACCGCGACUUACG   CG  G             C CGC     C                  GCAG  G             GCA  -- UGGCACCUACCUU
Stem-loop sequence	ACUGAACUUAGACACCUCAGCGCCAAAUAGCAUGGCGCUGAAUGUACGUUGGCACGCUGACUCAGCCUUCCAUCCACGGUGGCACGGCAUUCAGCGCCAGGUGACGUGGCGCUGAGGUGUCUAACUUCAGCGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
CT837884.1	ncRNA:24   CCGCGACUCCACAGAUUCAAGUCA   1   |||||||||||||||||||||||* targets:930   GGCGCUGAGGUGUCUAAGUUCAGC   953 Target Full Sequence	1.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA058P19, full insert sequence	NA	coding protein	psRNATarget
AK241139.1	ncRNA:24   CCGCGACUCCACAGAUUCAAGUCA   1   |||||||||||||||||||||||* targets:925   GGCGCUGAGGUGUCUAAGUUCAGC   948 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J065099H13, full insert sequence	NA	coding protein	psRNATarget
XM_015761838.1	ncRNA:24   CCGCGACUCCACAGAUUCAAGUCA   1   |||||||||||||||||||||||* targets:3752   GGCGCUGAGGUGUCUAAGUUCAGC   3775 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4350578 (LOC4350578), transcript variant X2, mRNA	uncharacterized LOC4350578(LOC4350578)	coding protein	psRNATarget
XM_015761837.1	ncRNA:24   CCGCGACUCCACAGAUUCAAGUCA   1   |||||||||||||||||||||||* targets:3755   GGCGCUGAGGUGUCUAAGUUCAGC   3778 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4350578 (LOC4350578), transcript variant X1, mRNA	uncharacterized LOC4350578(LOC4350578)	coding protein	psRNATarget
XM_015770638.1	ncRNA:24   CCGCGACUCCACAGAUUCAAGUCA   1   ||||=||||||||||||||||||* targets:502   GGCGUUGAGGUGUCUAAGUUCAGC   525 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329649 (LOC4329649), transcript variant X2, mRNA	uncharacterized LOC4329649(LOC4329649)	coding protein	psRNATarget
XM_015770637.1	ncRNA:24   CCGCGACUCCACAGAUUCAAGUCA   1   ||||=||||||||||||||||||* targets:502   GGCGUUGAGGUGUCUAAGUUCAGC   525 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329649 (LOC4329649), transcript variant X1, mRNA	uncharacterized LOC4329649(LOC4329649)	coding protein	psRNATarget
AK105004.2	ncRNA:24   CCGCGACUCCACAGAUUCAAGUCA   1   |||||||||||||||||||||*|* targets:385   GGCGCUGAGGUGUCUAAGUUCCGC   408 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-006-B03, full insert sequence	NA	coding protein	psRNATarget
XM_015766258.1	ncRNA:24   CCGCGACUCCACAGAUUCAAGUCA   1   |||||||||||||||||||||*|* targets:1210   GGCGCUGAGGUGUCUAAGUUCCGC   1233 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9269164 (LOC9269164), mRNA	uncharacterized LOC9269164(LOC9269164)	coding protein	psRNATarget
XM_015788685.1	ncRNA:24   CCGCGACUCCACAGAUUCAAGUCA   1   ||||=||||||||||||*|||||* targets:1641   GGCGUUGAGGUGUCUAAUUUCAGC   1664 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probable inactive purple acid phosphatase 28 (LOC4341954), transcript variant X1, mRNA	probable inactive purple acid phosphatase 28(LOC4341954)	coding protein	psRNATarget
XM_015788686.1	ncRNA:24   CCGCGACUCCACAGAUUCAAGUCA   1   ||||=||||||||||||*|||||* targets:1759   GGCGUUGAGGUGUCUAAUUUCAGC   1782 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probable inactive purple acid phosphatase 28 (LOC4341954), transcript variant X2, mRNA	probable inactive purple acid phosphatase 28(LOC4341954)	coding protein	psRNATarget
XM_015795041.1	ncRNA:24   CCGCGACUCCACAGAUUCAAGUCA   1   ||||||||**|||||||||||||| targets:1307   GGCGCUGAUAUGUCUAAGUUCAGU   1330 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group putative protease Do-like 14 (LOC9268118), transcript variant X6, mRNA	putative protease Do-like 14(LOC9268118)	coding protein	psRNATarget
XM_015795037.1	ncRNA:24   CCGCGACUCCACAGAUUCAAGUCA   1   ||||||||**|||||||||||||| targets:1892   GGCGCUGAUAUGUCUAAGUUCAGU   1915 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group putative protease Do-like 14 (LOC9268118), transcript variant X1, mRNA	putative protease Do-like 14(LOC9268118)	coding protein	psRNATarget
XM_015795039.1	ncRNA:24   CCGCGACUCCACAGAUUCAAGUCA   1   ||||||||**|||||||||||||| targets:2165   GGCGCUGAUAUGUCUAAGUUCAGU   2188 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group putative protease Do-like 14 (LOC9268118), transcript variant X4, mRNA	putative protease Do-like 14(LOC9268118)	coding protein	psRNATarget
XM_015795040.1	ncRNA:24   CCGCGACUCCACAGAUUCAAGUCA   1   ||||||||**|||||||||||||| targets:2244   GGCGCUGAUAUGUCUAAGUUCAGU   2267 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group putative protease Do-like 14 (LOC9268118), transcript variant X5, mRNA	putative protease Do-like 14(LOC9268118)	coding protein	psRNATarget
XM_015795038.1	ncRNA:24   CCGCGACUCCACAGAUUCAAGUCA   1   ||||||||**|||||||||||||| targets:2264   GGCGCUGAUAUGUCUAAGUUCAGU   2287 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group putative protease Do-like 14 (LOC9268118), transcript variant X3, mRNA	putative protease Do-like 14(LOC9268118)	coding protein	psRNATarget