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BaseInfo

ncRNA ID novel_osa_miR981
Species Oryza sativa
Class miRNA
Genome position Chr11:1699423-1699464 [-]
Reference genome IRGSP-1.0
Source SRR1742991
Length 19
Mature sequence(if miRNA) 24 - UCGAUAUAUAUGUGGAAUC - 42
Stem-loop(if miRNA) --            -  G  U
  UCGAUAUAUAUG UG AA C
  |||||||||||| || || G
  AGUUAUGUAUAC GC UU U
AA            C  G  U
Stem-loop sequence UCGAUAUAUAUGUGGAAUCGUUUUGCGCCAUAUGUAUUGAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015780237.1
ncRNA:19   CUAAGGUGUAUAUAUAGCU   1
  |*||==|||||||||||||
targets:184   GUUUUUACAUAUAUAUCGA   202

3.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4326495 (LOC4326495), transcript variant X2, mRNA uncharacterized LOC4326495(LOC4326495) coding protein psRNATarget
XM_015780246.1
ncRNA:19   CUAAGGUGUAUAUAUAGCU   1
  |*||==|||||||||||||
targets:184   GUUUUUACAUAUAUAUCGA   202

3.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4326495 (LOC4326495), transcript variant X3, mRNA uncharacterized LOC4326495(LOC4326495) coding protein psRNATarget