ncRNA ID | novel_osa_miR976 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr9:16527699-16527806 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1742991 |
Length | 24 |
Mature sequence(if miRNA) | 85 - AUUACCGAUACCAUAUCCGCAUCC - 108 |
Stem-loop(if miRNA) |
--    -     A  AU      A    C     CA     ---CC      -C   AA   AUUA CCGAU CC  AUCCGC UCCG AUCCG  UCUGG     GGAUAU  UAA  A   |||| ||||| ||  |||||| |||| |||||  |||||     ||||||  |||   UAAU GGCUA GG  UAGGCG AGGU UAGGC  AGGCU     CCUAUA  AUU  C UA    A     -  -C      -    U     --     UCACU      CC   CC |
Stem-loop sequence | AUUACCGAUACCAUAUCCGCAUCCGCAUCCGCAUCUGGCCGGAUAUCUAAAAACCCUUACCAUAUCCUCACUUCGGACGGAUUUGGAGCGGAUCGGAUCGGAUAAUAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK101107.1 |
|
1.5 | Oryza sativa Japonica Group cDNA clone:J033025D23, full insert sequence | NA | coding protein | psRNATarget |