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BaseInfo

ncRNA ID novel_osa_miR976
Species Oryza sativa
Class miRNA
Genome position Chr9:16527699-16527806 [-]
Reference genome IRGSP-1.0
Source SRR1742991
Length 24
Mature sequence(if miRNA) 85 - AUUACCGAUACCAUAUCCGCAUCC - 108
Stem-loop(if miRNA) --    -     A  AU      A    C     CA     ---CC      -C   AA
  AUUA CCGAU CC  AUCCGC UCCG AUCCG  UCUGG     GGAUAU  UAA  A
  |||| ||||| ||  |||||| |||| |||||  |||||     ||||||  |||
  UAAU GGCUA GG  UAGGCG AGGU UAGGC  AGGCU     CCUAUA  AUU  C
UA    A     -  -C      -    U     --     UCACU      CC   CC
Stem-loop sequence AUUACCGAUACCAUAUCCGCAUCCGCAUCCGCAUCUGGCCGGAUAUCUAAAAACCCUUACCAUAUCCUCACUUCGGACGGAUUUGGAGCGGAUCGGAUCGGAUAAUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK101107.1
ncRNA:24   CCUACGCCUAUACCAUAGCCAUUA   1
  |||||||||||||||||||||*||
targets:1891   GGAUGCGGAUAUGGUAUCGGUUAU   1914

1.5 Oryza sativa Japonica Group cDNA clone:J033025D23, full insert sequence NA coding protein psRNATarget