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BaseInfo

ncRNA ID	novel_osa_miR975
Species	Oryza sativa
Class	miRNA
Genome position	Chr9:18931652-18931766 [-]
Reference genome	IRGSP-1.0
Source	SRR1742991
Length	24
Mature sequence(if miRNA)	92 - AACCGCGAGACGAAACUUUUGAGC - 115
Stem-loop(if miRNA)	-AAC           A        C       A  CGCC      AUA       UAC     CGCGAGACGAA CUUUUGAG CUAAUUA UC    AUUAGC   UAUAAGU   U     ||||||||||| |||||||| ||||||| ||    ||||||   |||||||   G     GCGCUCUGCUU GAAAACUC GAUUAAU AG    UAAUCG   GUGUUCA   U UUUA           A        A       C  AUAU      ---       CGA
Stem-loop sequence	AACCGCGAGACGAAACUUUUGAGCCUAAUUAAUCCGCCAUUAGCAUAUAUAAGUUACUGUAGCACUUGUGGCUAAUUAUAGACUAAUUAGACUCAAAAGAUUCGUCUCGCGAUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK121199.1	ncRNA:24   CGAGUUUUCAAAGCAGAGCGCCAA   1   |||||||||*|||||||||=|||| targets:1470   GCUCAAAAGAUUCGUCUCGUGGUU   1493 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023087G06, full insert sequence	NA	coding protein	psRNATarget
CT833754.1	ncRNA:24   CGAGUUUUCAAAGCAGAGCGCCAA   1   |||=|||||*|||||||||=|||| targets:808   GCUUAAAAGAUUCGUCUCGUGGUU   831 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI026E11, full insert sequence	NA	coding protein	psRNATarget
AK062636.1	ncRNA:24   CGAGUUUUCAAAGCAGAGCGCCAA   1   |||=|||||*|||||||||=|||| targets:806   GCUUAAAAGAUUCGUCUCGUGGUU   829 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-105-D02, full insert sequence	NA	coding protein	psRNATarget
XM_015790304.1	ncRNA:24   CGAGUUUUCAAAGCAGAGCGCCAA   1   |||=|||||*|||||||||=|||| targets:814   GCUUAAAAGAUUCGUCUCGUGGUU   837 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group RING-H2 finger protein ATL45 (LOC4344335), mRNA	RING-H2 finger protein ATL45(LOC4344335)	coding protein	psRNATarget
CT831461.1	ncRNA:24   CGAGUUUUCAAAGCAGAGCGCCAA   1   *||=|||||*|||||||||||||| targets:438   UCUUAAAAGAUUCGUCUCGCGGUU   461 Target Full Sequence	1.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA110A21, full insert sequence	NA	coding protein	psRNATarget
AK103318.1	ncRNA:24   CGAGUUUUCAAAGCAGAGCGCCAA   1   |||||||||*|||||||||||*|| targets:1157   GCUCAAAAGAUUCGUCUCGCGAUU   1180 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033125I08, full insert sequence	NA	coding protein	psRNATarget
XM_015761412.1	ncRNA:24   CGAGUUUUCAAAGCAGAGCGCCAA   1   |||||||||*|||||||||||*|| targets:635   GCUCAAAAGAUUCGUCUCGCGAUU   658 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group nucleobase-ascorbate transporter 2 (LOC4325616), mRNA	nucleobase-ascorbate transporter 2(LOC4325616)	coding protein	psRNATarget
AK067512.1	ncRNA:24   CGAGUUUUCAAAGCAGAGCGCCAA   1   |||||||||*|||||||||||*|| targets:1191   GCUCAAAAGAUUCGUCUCGCGAUU   1214 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013109G08, full insert sequence	NA	coding protein	psRNATarget
AK101179.1	ncRNA:24   CGAGUUUUCAAAGCAGAGCGCCAA   1   |||=|||||*|||||||||||*|| targets:2728   GCUUAAAAGAUUCGUCUCGCGAUU   2751 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033029D23, full insert sequence	NA	coding protein	psRNATarget
AK288820.1	ncRNA:24   CGAGUUUUCAAAGCAGAGCGCCAA   1   *|*||||||*|||||||||||*|| targets:3106   ACACAAAAGAUUCGUCUCGCGAUU   3129 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090073D04, full insert sequence	NA	coding protein	psRNATarget