ncRNA ID | novel_osa_miR966 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr8:3272402-3272524 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1742991;SRR1742992;SRR1742993;SRR1738214;SRR1738221;SRR1738224 |
Length | 24 |
Mature sequence(if miRNA) | 100 - CACCGAGAACGGUCACAUGAGCUC - 123 |
Stem-loop(if miRNA) |
--    -  -A   -        U  CG        U   -UC    AAAC      GGU   - G   GCUC UG  ACU UUCUUGGU GA  UCGGAGAU GAC   AGAC    CCUUUA   GCC C C   |||| ||  ||| |||||||| ||  |||||||| |||   ||||    ||||||   ||| |   CGAG AC  UGG AAGAGCCA CU  AGUCUCUA UUG   UCUG    GGAAAU   CGG G A CU    U  AC   C        -  CA        -   CAA    --AA      AGU   A C |
Stem-loop sequence | GCUCUGAACUUUCUUGGUUGACGUCGGAGAUUGACUCAGACAAACCCUUUAGGUGCCCGCACGAGGCUGAUAAAGGAAGUCUAACGUUAUCUCUGAACUCACCGAGAACGGUCACAUGAGCUC |