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BaseInfo

ncRNA ID novel_osa_miR966
Species Oryza sativa
Class miRNA
Genome position Chr8:3272402-3272524 [+]
Reference genome IRGSP-1.0
Source SRR1742991;SRR1742992;SRR1742993;SRR1738214;SRR1738221;SRR1738224
Length 24
Mature sequence(if miRNA) 100 - CACCGAGAACGGUCACAUGAGCUC - 123
Stem-loop(if miRNA) --    -  -A   -        U  CG        U   -UC    AAAC      GGU   - G
  GCUC UG  ACU UUCUUGGU GA  UCGGAGAU GAC   AGAC    CCUUUA   GCC C C
  |||| ||  ||| |||||||| ||  |||||||| |||   ||||    ||||||   ||| |
  CGAG AC  UGG AAGAGCCA CU  AGUCUCUA UUG   UCUG    GGAAAU   CGG G A
CU    U  AC   C        -  CA        -   CAA    --AA      AGU   A C
Stem-loop sequence GCUCUGAACUUUCUUGGUUGACGUCGGAGAUUGACUCAGACAAACCCUUUAGGUGCCCGCACGAGGCUGAUAAAGGAAGUCUAACGUUAUCUCUGAACUCACCGAGAACGGUCACAUGAGCUC