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BaseInfo

ncRNA ID	novel_osa_miR952
Species	Oryza sativa
Class	miRNA
Genome position	Chr7:24944203-24944287 [+]
Reference genome	IRGSP-1.0
Source	SRR1742991
Length	23
Mature sequence(if miRNA)	63 - UGGAAGUUUGGAAAAAAAAAGUU - 85
Stem-loop(if miRNA)	--      G    UG -  -G     G G   - GU   UG AA   CUUUUU UUUC  A CU  UGACU U UUU A  UUC  A  A   |||||| ||||  | ||  ||||| | ||| |  |||  |   GAAAAA AAAG  U GA  GUUGA A GAG U  AAG  U  A UU      A    GU U  AG     A G   C UG   GU GA
Stem-loop sequence	CUUUUUGUUUCUGACUGUGACUGUGUUUAGUUUCUGAAAAAAGUUGGAAGUUCGAGGAAAGUUGGAAGUUUGGAAAAAAAAAGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015760156.1	ncRNA:23   UUGAAAAAAAAAGGUUUGAAGGU   1   ||||||||||||=|||||||||= targets:2158   AACUUUUUUUUUUCAAACUUCCG   2180 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group laccase-19 (LOC4351005), mRNA	laccase-19(LOC4351005)	coding protein	psRNATarget
AK062379.1	ncRNA:23   UUGAAAAAAAAAGGUUUGAAGGU   1   |==|||||||||||||||||||| targets:403   AGUUUUUUUUUUCCAAACUUCCA   425 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:001-102-B07, full insert sequence	NA	coding protein	psRNATarget
AK120334.1	ncRNA:23   UUGAAAAAAAAAGGUUUGAAGGU   1   ||*|||||||||||||||||||| targets:1660   AAGUUUUUUUUUCCAAACUUCCA   1682 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J013059I04, full insert sequence	NA	coding protein	psRNATarget
AK109584.1	ncRNA:23   UUGAAAAAAAAAGGUUUGAAGGU   1   |==|||||||||||||||||||* targets:493   AGUUUUUUUUUUCCAAACUUCCU   515 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:002-137-A10, full insert sequence	NA	coding protein	psRNATarget
AK288660.1	ncRNA:23   UUGAAAAAAAAAGGUUUGAAGGU   1   ||*||||||||||||||||||=| targets:1842   AAGUUUUUUUUUCCAAACUUCUA   1864 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090057N05, full insert sequence	NA	coding protein	psRNATarget
AK287815.1	ncRNA:23   UUGAAAAAAAAAGGUUUGAAGGU   1   ===||||||||||=||||||||| targets:324   GGUUUUUUUUUUCUAAACUUCCA   346 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J065180O15, full insert sequence	NA	coding protein	psRNATarget
AK106655.1	ncRNA:23   UUGAAAAAAAAAGGUUUGAAGGU   1   ||*|||||||||||||||||||* targets:526   AAGUUUUUUUUUCCAAACUUCCU   548 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:002-113-G04, full insert sequence	NA	coding protein	psRNATarget
XM_015757469.1	ncRNA:23   UUGAAAAAAAAAGGUUUGAAGGU   1   *|***|||||||||||||||||| targets:2576   CAAAGUUUUUUUCCAAACUUCCA   2598 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9268688 (LOC9268688), mRNA	uncharacterized LOC9268688(LOC9268688)	coding protein	psRNATarget