Search result

BaseInfo

ncRNA ID novel_osa_miR947
Species Oryza sativa
Class miRNA
Genome position Chr7:2367684-2367762 [-]
Reference genome IRGSP-1.0
Source SRR1742991
Length 24
Mature sequence(if miRNA) 56 - ACAGGAUUGAUUUUCUUGGACGCC - 79
Stem-loop(if miRNA) A  -     GA   UC     C    -----        AGU
 CA GGAUU  UUU  UUGGA GCCA     GCCCCGUU   U
 || |||||  |||  ||||| ||||     ||||||||
 GU CCUAA  AGG  GGCCU CGGU     CGGGGCGG   U
G  G     AA   UC     -    GAAUA        ACC
Stem-loop sequence ACAGGAUUGAUUUUCUUGGACGCCAGCCCCGUUAGUUUCCAGGCGGGGCAUAAGUGGCUCCGGCUGGAAAAAUCCGUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015790322.1
ncRNA:24   CCGCAGGUUCUUUUAGUUAGGACA   1
  ||||||||||||||||||||||||
targets:41   GGCGUCCAAGAAAAUCAAUCCUGU   64

0.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9267230 (LOC9267230), mRNA uncharacterized LOC9267230(LOC9267230) coding protein psRNATarget