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BaseInfo

ncRNA ID novel_osa_miR946
Species Oryza sativa
Class miRNA
Genome position Chr6:19177202-19177316 [+]
Reference genome IRGSP-1.0
Source SRR1555746;SRR1555747;SRR1555749;SRR2097778;SRR2097779;SRR2098557;SRR2098560;SRR2099567;SRR1556011;SRR1556014;SRR4407779;SRR4407956;SRR1556016;SRR4407957;SRR4407958;SRR1556020
Length 24
Mature sequence(if miRNA) 92 - AAUGUUACUAUUACUUUGUCGGAU - 115
Stem-loop(if miRNA) --        A  UUU                 UUUUA  UAUAUAUGUUAUAGUUUA
  CCGACAAA UA   GUAAUAUUGUUCACAAA     CU                  U
  |||||||| ||   |||||||||||||||||     ||                  A
  GGCUGUUU AU   CAUUGUAACAAGUGUUU     CU                  A
UA        C  UAU                 --UAA  GUAUAGAGAAUAGACUAA
Stem-loop sequence CCGACAAAAUAUUUGUAAUAUUGUUCACAAAUUUUACUUAUAUAUGUUAUAGUUUAUAAAAUCAGAUAAGAGAUAUGUCAAUUUUGUGAACAAUGUUACUAUUACUUUGUCGGAU