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BaseInfo

ncRNA ID novel_osa_miR945
Species Oryza sativa
Class miRNA
Genome position Chr7:10246865-10246977 [-]
Reference genome IRGSP-1.0
Source SRR1742991
Length 24
Mature sequence(if miRNA) 90 - UCUAAAAUCUGUGUGAUUUGGACC - 113
Stem-loop(if miRNA) --UC                U  ACCUAAA  UGAUGGAUAGCUAGUCCCUAAAUUUU
    UAAAAUCUGUGUGAUU GG       AA                          U
    |||||||||||||||| ||       ||                          C
    GUUUUAGACGUACUAA CC       GG                          A
CCAA                C  ----CAA  UUUAGCCAGUUACAUACUUAUCCAAU
Stem-loop sequence UCUAAAAUCUGUGUGAUUUGGACCUAAAAAUGAUGGAUAGCUAGUCCCUAAAUUUUUCAUAACCUAUUCAUACAUUGACCGAUUUGGAACCCCAAUCAUGCAGAUUUUGAACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
CT829827.1
ncRNA:24   CCAGGUUUAGUGUGUCUAAAAUCU   1
  ||||=|||||||||||||||||||
targets:945   GGUCUAAAUCACACAGAUUUUAGA   968

0.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI004M07, full insert sequence NA coding protein psRNATarget