ncRNA ID | novel_osa_miR945 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr7:10246865-10246977 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1742991 |
Length | 24 |
Mature sequence(if miRNA) | 90 - UCUAAAAUCUGUGUGAUUUGGACC - 113 |
Stem-loop(if miRNA) |
--UC                U  ACCUAAA  UGAUGGAUAGCUAGUCCCUAAAUUUU     UAAAAUCUGUGUGAUU GG       AA                          U     |||||||||||||||| ||       ||                          C     GUUUUAGACGUACUAA CC       GG                          A CCAA                C  ----CAA  UUUAGCCAGUUACAUACUUAUCCAAU |
Stem-loop sequence | UCUAAAAUCUGUGUGAUUUGGACCUAAAAAUGAUGGAUAGCUAGUCCCUAAAUUUUUCAUAACCUAUUCAUACAUUGACCGAUUUGGAACCCCAAUCAUGCAGAUUUUGAACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CT829827.1 |
|
0.0 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI004M07, full insert sequence | NA | coding protein | psRNATarget |