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BaseInfo

ncRNA ID	novel_osa_miR943
Species	Oryza sativa
Class	miRNA
Genome position	Chr6:21985486-21985581 [-]
Reference genome	IRGSP-1.0
Source	SRR1742991
Length	24
Mature sequence(if miRNA)	1 - UAUAAAAACCGGCACCUAUAGAAU - 24
Stem-loop(if miRNA)	--A                   ---AUU                   CC    UUAUAGGUGUCGGUUUUUA      AACCGGCACCUUUAAUAUA  U    |||||||||||||||||||      |||||||||||||||||||  A    GAUAUCCACGGCCAAAAAU      UUGGCCGUGGAAAUUAUAU  U UAA                   AUCUUU                   AA
Stem-loop sequence	AUUAUAGGUGUCGGUUUUUAAUUAACCGGCACCUUUAAUAUACCUAUAAUAUAUUAAAGGUGCCGGUUUUUCUAUAAAAACCGGCACCUAUAGAAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK069235.1	ncRNA:24   UAAGAUAUCCACGGCCAAAAAUAU   1   ||*||||||||||||*|||||||* targets:3468   AUACUAUAGGUGCCGAUUUUUAUC   3491 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023010D04, full insert sequence	NA	coding protein	psRNATarget
AK288501.1	ncRNA:24   UAAGAUAUCCACGGCCAAAAAUAU   1   =****||||||||||||||||||| targets:4143   GAGAGAUAGGUGCCGGUUUUUAUA   4166 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090041C22, full insert sequence	NA	coding protein	psRNATarget
AK288182.1	ncRNA:24   UAAGAUAUCCACGGCCAAAAAUAU   1   |*||-||||||||||||||||||* targets:1060   AAUC-AUAGGUGCCGGUUUUUAUU   1082 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090005J12, full insert sequence	NA	coding protein	psRNATarget
AK288525.1	ncRNA:24   UAAGAUAUCCACGGCCAAAAAUAU   1   ***=||||||||||||||||*||* targets:1334   UCAUUAUAGGUGCCGGUUUUAAUU   1357 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090044E09, full insert sequence	NA	coding protein	psRNATarget
AK107092.1	ncRNA:24   UAAGAUAUCCACGGCCAAAAAUAU   1   =|**|||||||||||||||||*|* targets:837   GUAGUAUAGGUGCCGGUUUUUCUC   860 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-121-H02, full insert sequence	NA	coding protein	psRNATarget