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BaseInfo

ncRNA ID novel_osa_miR940
Species Oryza sativa
Class miRNA
Genome position Chr6:17265339-17265402 [+]
Reference genome IRGSP-1.0
Source SRR1555746;SRR1556011;SRR1556014;SRR4407959;SRR4407960;SRR4407962
Length 24
Mature sequence(if miRNA) 41 - AGCCGAUUGUAGAUUAGAUAGCGG - 64
Stem-loop(if miRNA) --         C   --        C U    C
  GCUAUUUAA CUG  GUCGGCUG C UCUA C
  ||||||||| |||  |||||||| | ||||
  CGAUAGAUU GAU  UAGCCGAU G AGAU G
GG         A   GU        U U    A
Stem-loop sequence GCUAUUUAACCUGGUCGGCUGCCUUCUACCGAUAGAUGUUAGCCGAUUGUAGAUUAGAUAGCGG