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BaseInfo

ncRNA ID	novel_osa_miR935
Species	Oryza sativa
Class	miRNA
Genome position	Chr6:968295-968487 [-]
Reference genome	IRGSP-1.0
Source	SRR1742991;SRR1742992
Length	24
Mature sequence(if miRNA)	170 - CAUACUAGAUCUAUCUGAUCGGCU - 193
Stem-loop(if miRNA)	---CAU          UC         -AU C   A    -UU      -    A   UA       C  C    U        UAUACUGUC    CAU       ACUAGAUCUA  UGAUCGGCU   G UAU GACG   UAUAAU CUUU UGU  AUGUAUA UU GAUC AAGUGAUU         UCGG   G       ||||||||||  |||||||||   | ||| ||||   |||||| |||| |||  ||||||| || |||| ||||||||         ||||       UGAUUUAGAU  GCUAGCCGA   C AUA UUGC   AUAUUA GAAG ACA  UACAUAU AA UUAG UUCACUAA         AGCC   G CUGUCU          GA         CAU U   A    UAU      A    -   GC       A  U    -        -CCCUAUCU    AGC
Stem-loop sequence	CAUACUAGAUCUAUCUGAUCGGCUAUGCUAUAGACGUUUAUAAUCUUUAUGUUAAUGUAUACUUCGAUCUAAGUGAUUUAUACUGUCUCGGCAUGGCGACCGAUCUAUCCCAAUCACUUGAUUUAAAUAUACAUCGACAGAAGAAUUAUAUAUCGUUAAUAUCUACAGCCGAUCGAGUAGAUUUAGUUCUGUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK064569.1	ncRNA:24   UCGGCUAGUCUAUCUAGAUCAUAC   1   ||||||||||||||||||||*||| targets:89   AGCCGAUCAGAUAGAUCUAGCAUG   112 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:002-112-D07, full insert sequence	NA	coding protein	psRNATarget
AK288643.1	ncRNA:24   UCGGCUAGUCUAUCUAGAUCAUAC   1   ||||||||||||||||||||*||| targets:1201   AGCCGAUCAGAUAGAUCUAGCAUG   1224 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090056G13, full insert sequence	NA	coding protein	psRNATarget
AK288616.1	ncRNA:24   UCGGCUAGUCUAUCUAGAUCAUAC   1   ||||||||||||||||||||*||| targets:2143   AGCCGAUCAGAUAGAUCUAGCAUG   2166 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090054A10, full insert sequence	NA	coding protein	psRNATarget
AK289092.1	ncRNA:24   UCGGCUAGUCUAUCUAGAUCAUAC   1   ||||||||||||||||||||*||| targets:341   AGCCGAUCAGAUAGAUCUAGCAUG   364 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090096B09, full insert sequence	NA	coding protein	psRNATarget