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BaseInfo

ncRNA ID novel_osa_miR927
Species Oryza sativa
Class miRNA
Genome position Chr5:13846834-13846937 [-]
Reference genome IRGSP-1.0
Source SRR1742991;SRR4407959
Length 24
Mature sequence(if miRNA) 81 - AAUUAACUAGCAUAGAUGACUCCA - 104
Stem-loop(if miRNA) --                                -   G     --A   -  A
  AAUUAACUAGCAUAGAUGACUCCACUCCACAA UAU CUUGG   GGA CU G
  |||||||||||||||||||||||||||||||| ||| |||||   ||| || A
  UUAAUUGAUCGUAUCUACUGAGGUGGGGUGUU GUA GAACU   CCU GG C
AU                                C   -     AGC   A  U
Stem-loop sequence AAUUAACUAGCAUAGAUGACUCCACUCCACAAUAUGCUUGGAGGACUAGACUGGAUCCCGAUCAAGAUGCUUGUGGGGUGGAGUCAUCUAUGCUAGUUAAUUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK068966.1
ncRNA:24   ACCUCAGUAGAUACGAUCAAUUAA   1
  *****|||||*||||||||||=||
targets:684   AAUCUUCAUCAAUGCUAGUUAGUU   707

2.5 Oryza sativa Japonica Group cDNA clone:J013170C17, full insert sequence NA coding protein psRNATarget