Search result

BaseInfo

ncRNA ID	novel_osa_miR926
Species	Oryza sativa
Class	miRNA
Genome position	Chr5:21598321-21598370 [-]
Reference genome	IRGSP-1.0
Source	SRR1742991;SRR1743000
Length	24
Mature sequence(if miRNA)	27 - AAUUACACUAUAGUUACACUGUAA - 50
Stem-loop(if miRNA)	--AA                    A     UUACACUAUAGUUACACUGU A     ||||||||||||||||||||     AAUGUGGUGUCAAUGUGACG C CAUC                    U
Stem-loop sequence	AAUUACACUAUAGUUACACUGUAACUGCAGUGUAACUGUGGUGUAACUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288282.1	ncRNA:24   AAUGUCACAUUGAUAUCACAUUAA   1   *||||||||||||||||||*|||| targets:3047   GUACAGUGUAACUAUAGUGAAAUU   3070 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090018C04, full insert sequence	NA	coding protein	psRNATarget
AK063425.1	ncRNA:24   AAUGUCACAUUGAUAUCACAUUAA   1   *||=|*||||||||||||||||*| targets:1361   AUAUAAUGUAACUAUAGUGUAAGU   1384 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-115-C11, full insert sequence	NA	coding protein	psRNATarget
XM_015784049.1	ncRNA:24   AAUGUCACAUUGAUAUCACAUUAA   1   ||*==*|*|||||||||||||||* targets:856   UUCUGAUAUAACUAUAGUGUAAUG   879 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107281101 (LOC107281101), mRNA	uncharacterized LOC107281101(LOC107281101)	coding protein	psRNATarget