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BaseInfo

ncRNA ID novel_osa_miR924
Species Oryza sativa
Class miRNA
Genome position Chr6:14189634-14189722 [+]
Reference genome IRGSP-1.0
Source SRR1555746;SRR2099568;SRR2099745;SRR1556014;SRR3234040;SRR3234043;SRR3234045;SRR5049786
Length 21
Mature sequence(if miRNA) 1 - AGCGGGGUAGAGGAAUUGGUC - 21
Stem-loop(if miRNA) --      GUA   G       CAA  CA  A     ---AAA  ACA
  AGCGGG   GAG AAUUGGU   CU  UU GGCUC      GC   G
  ||||||   ||| |||||||   ||  || |||||      ||
  UUGUUC   UUC UUGGCUA   GA  AA CUGAG      CG   A
GU      ACC   G       --C  --  C     GAACUA  GUC
Stem-loop sequence AGCGGGGUAGAGGAAUUGGUCAACUCAUUAGGCUCAAAGCACAGACUGGCAUCAAGGAGUCCAAAGCAUCGGUUGCUUCCACUUGUUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015775368.1
ncRNA:21   CUGGUUAAGGAGAUGGGGCGA   1
  *=||*|||||||||||*||||
targets:536   CGCCCAUUCCUCUACCACGCU   556

2.5 PREDICTED: Oryza sativa Japonica Group peroxisomal membrane protein 11-2 (LOC9267541), mRNA peroxisomal membrane protein 11-2(LOC9267541) coding protein psRNATarget
XM_015789462.1
ncRNA:21   CUGGUUAAGGAGAUGGGGCGA   1
  |*|||*|||||||||||*|||
targets:350   GUCCACUUCCUCUACCCAGCU   370

2.5 PREDICTED: Oryza sativa Japonica Group proline-, glutamic acid- and leucine-rich protein 1 (LOC4343789), mRNA proline-, glutamic acid- and leucine-rich protein 1(LOC4343789) coding protein psRNATarget