ncRNA ID | novel_osa_miR924 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr6:14189634-14189722 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1555746;SRR2099568;SRR2099745;SRR1556014;SRR3234040;SRR3234043;SRR3234045;SRR5049786 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AGCGGGGUAGAGGAAUUGGUC - 21 |
Stem-loop(if miRNA) |
--      GUA   G       CAA  CA  A     ---AAA  ACA   AGCGGG   GAG AAUUGGU   CU  UU GGCUC      GC   G   ||||||   ||| |||||||   ||  || |||||      ||   UUGUUC   UUC UUGGCUA   GA  AA CUGAG      CG   A GU      ACC   G       --C  --  C     GAACUA  GUC |
Stem-loop sequence | AGCGGGGUAGAGGAAUUGGUCAACUCAUUAGGCUCAAAGCACAGACUGGCAUCAAGGAGUCCAAAGCAUCGGUUGCUUCCACUUGUUUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015775368.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group peroxisomal membrane protein 11-2 (LOC9267541), mRNA | peroxisomal membrane protein 11-2(LOC9267541) | coding protein | psRNATarget | |||||||||
XM_015789462.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group proline-, glutamic acid- and leucine-rich protein 1 (LOC4343789), mRNA | proline-, glutamic acid- and leucine-rich protein 1(LOC4343789) | coding protein | psRNATarget |