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BaseInfo

ncRNA ID	novel_osa_miR918
Species	Oryza sativa
Class	miRNA
Genome position	Chr5:23597318-23597395 [+]
Reference genome	IRGSP-1.0
Source	SRR1742991
Length	24
Mature sequence(if miRNA)	55 - GAUGUCCUGUAGCAAAUUUUGCCU - 78
Stem-loop(if miRNA)	--            U                      AU   GUAAAAUUUGCU CAGGACAUCUAAAAAAUGUGUA  U   |||||||||||| ||||||||||||||||||||||   CGUUUUAAACGA GUCCUGUAGGUUUUUUACACGU  A UC            U                      CG
Stem-loop sequence	GUAAAAUUUGCUUCAGGACAUCUAAAAAAUGUGUAAUUAGCUGCACAUUUUUUGGAUGUCCUGUAGCAAAUUUUGCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK287839.1	ncRNA:24   UCCGUUUUAAACGAUGUCCUGUAG   1   |||||||||||||||=|||||||| targets:1590   AGGCAAAAUUUGCUAUAGGACAUC   1613 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J065193C18, full insert sequence	NA	coding protein	psRNATarget
AK120099.1	ncRNA:24   UCCGUUUUAAACGAUGUCCUGUAG   1   |||||||=|||||||||||||||| targets:3426   AGGCAAAGUUUGCUACAGGACAUC   3449 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J013022F17, full insert sequence	NA	coding protein	psRNATarget
AK288621.1	ncRNA:24   UCCGUUUUAAACGAUGUCCUGUAG   1   =||=|||||||||||||||||||= targets:166   GGGUAAAAUUUGCUACAGGACAUU   189 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090054F11, full insert sequence	NA	coding protein	psRNATarget
XM_015762233.1	ncRNA:24   UCCGUUUUAAACGAUGUCCUGUAG   1   ||||||||||||||||||||||*= targets:379   AGGCAAAAUUUGCUACAGGACACU   402 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107279532 (LOC107279532), transcript variant X2, mRNA	uncharacterized LOC107279532(LOC107279532)	coding protein	psRNATarget
XM_015762232.1	ncRNA:24   UCCGUUUUAAACGAUGUCCUGUAG   1   ||||||||||||||||||||||*= targets:379   AGGCAAAAUUUGCUACAGGACACU   402 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107279532 (LOC107279532), transcript variant X1, mRNA	uncharacterized LOC107279532(LOC107279532)	coding protein	psRNATarget
AK067409.1	ncRNA:24   UCCGUUUUAAACGAUGUCCUGUAG   1   |||||=||||||||||*||||||| targets:899   AGGCAGAAUUUGCUACUGGACAUC   922 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013102H16, full insert sequence	NA	coding protein	psRNATarget
LQ236574.1	ncRNA:24   UC--CGUUUUAAACGAUGUCCUGU-AG   1   ||--||||||||||||||||||||-|| targets:49   AGUAGCAAAAUUUGCUACAGGACACUC   75 Target Full Sequence	3.0	Sequence 2569 from Patent EP2985353	NA	coding protein	psRNATarget
JB164905.1	ncRNA:24   UC--CGUUUUAAACGAUGUCCUGU-AG   1   ||--||||||||||||||||||||-|| targets:49   AGUAGCAAAAUUUGCUACAGGACACUC   75 Target Full Sequence	3.0	Sequence 2569 from Patent EP2559767	NA	coding protein	psRNATarget
HI404444.1	ncRNA:24   UC--CGUUUUAAACGAUGUCCUGU-AG   1   ||--||||||||||||||||||||-|| targets:49   AGUAGCAAAAUUUGCUACAGGACACUC   75 Target Full Sequence	3.0	Sequence 2569 from Patent EP2074227	NA	coding protein	psRNATarget
AK120334.1	ncRNA:24   UCCGUUUUAAACGAUGUCCUGUAG   1   |||||||*|||||||||||||||* targets:1923   AGGCAAAUUUUGCUACAGGACAUG   1946 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J013059I04, full insert sequence	NA	coding protein	psRNATarget
AK288390.1	ncRNA:24   UCCGUUUUAAACGAUGUCCUGUAG   1   *|*||||||||||||||||=|||| targets:2458   CGACAAAAUUUGCUACAGGGCAUC   2481 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090027G18, full insert sequence	NA	coding protein	psRNATarget
JB164678.1	ncRNA:24   UCCGUUUUAAACGAUGUCCUGUAG   1   *||*|||*|||||||||||||||| targets:133   UGGGAAAUUUUGCUACAGGACAUC   156 Target Full Sequence	1.0	Sequence 2342 from Patent EP2559767	NA	coding protein	psRNATarget
HI404217.1	ncRNA:24   UCCGUUUUAAACGAUGUCCUGUAG   1   *||*|||*|||||||||||||||| targets:133   UGGGAAAUUUUGCUACAGGACAUC   156 Target Full Sequence	1.0	Sequence 2342 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236347.1	ncRNA:24   UCCGUUUUAAACGAUGUCCUGUAG   1   *||*|||*|||||||||||||||| targets:133   UGGGAAAUUUUGCUACAGGACAUC   156 Target Full Sequence	1.0	Sequence 2342 from Patent EP2985353	NA	coding protein	psRNATarget
AK288312.1	ncRNA:24   UCCGUUUUAAACGAUGUCCUGUAG   1   **|*||||*||||||||||||||| targets:1662   UAGAAAAAAUUGCUACAGGACAUC   1685 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090020K22, full insert sequence	NA	coding protein	psRNATarget