ncRNA ID | novel_osa_miR917 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr5:16776994-16777075 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1742991;SRR3123645;SRR5049781;SRR5049789;SRR5049792;SRR5351740;SRR1738226 |
Length | 23 |
Mature sequence(if miRNA) | 60 - AUACCGAUGUAGCACUUCACCCG - 82 |
Stem-loop(if miRNA) |
--UGC    -C              C  --AAC UUACAGAG      GGAG  CUAUGUUGGUAUUU AU     C        A      ||||  |||||||||||||| ||     |        A      CUUC  GAUGUAGCCAUAAA UG     G        A GCCCA    AC              A  CACAC AACGCUUA |
Stem-loop sequence | UGCGGAGCCUAUGUUGGUAUUUCAUAACCUUACAGAGAAAAUUCGCAAGCACACGUAAAAUACCGAUGUAGCACUUCACCCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK120243.1 |
|
1.5 | Oryza sativa Japonica Group cDNA clone:J013044H03, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK288892.1 |
|
1.5 | Oryza sativa Japonica Group cDNA, clone: J090080C08, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK065349.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J013022H13, full insert sequence | NA | coding protein | psRNATarget |