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BaseInfo

ncRNA ID	novel_osa_miR914
Species	Oryza sativa
Class	miRNA
Genome position	Chr5:4098910-4099074 [-]
Reference genome	IRGSP-1.0
Source	SRR1742991;SRR1742992;SRR1742993;SRR2097778;SRR4407960
Length	24
Mature sequence(if miRNA)	142 - AUAUCACCCCACAAACAUGCAAGU - 165
Stem-loop(if miRNA)	--       CC             G  C           C  C      U                CA    C      -  A   AUAUCAC  CACAAACAUGCAA UU AAAUUCGACUU UA AAGUUG AAUAAAAAUAACAAAU  AACU UGAGUA GU U   |||||||  ||||||||||||| || ||||||||||| || |||||| ||||||||||||||||  |||| |||||| ||   UAUAGUG  GUGUUUGUACGUU AA UUUAAGUUGAA AU UUCAAC UUGUUUUUAUUGUUUA  UUGA ACUUAU CG A UA       AU             G  U           A  A      U                AA    C      A  C
Stem-loop sequence	AUAUCACCCCACAAACAUGCAAGUUCAAAUUCGACUUCUACAAGUUGUAAUAAAAAUAACAAAUCAAACUCUGAGUAGUAUACGCAUAUUCACAGUUAAAUUUGUUAUUUUUGUUUCAACUUAUAAAAGUUGAAUUUUAAGUUGCAUGUUUGUGUAGUGAUAUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015788270.1	ncRNA:24   UGAACGUACAAACACCCCACUAUA   1   |||||||||||||||||||||||| targets:348   ACUUGCAUGUUUGUGGGGUGAUAU   371 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group ABC transporter G family member 28 (LOC4342153), transcript variant X1, mRNA	ABC transporter G family member 28(LOC4342153)	coding protein	psRNATarget
XM_015788271.1	ncRNA:24   UGAACGUACAAACACCCCACUAUA   1   |||||||||||||||||||||||| targets:348   ACUUGCAUGUUUGUGGGGUGAUAU   371 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group ABC transporter G family member 28 (LOC4342153), transcript variant X2, mRNA	ABC transporter G family member 28(LOC4342153)	coding protein	psRNATarget
XM_015762434.1	ncRNA:24   UGAACGUACAAACACCCCACUAUA   1   ||||||||||||||||*||||||| targets:931   ACUUGCAUGUUUGUGGAGUGAUAU   954 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group disease resistance RPP13-like protein 4 (LOC4327629), transcript variant X6, mRNA	disease resistance RPP13-like protein 4(LOC4327629)	coding protein	psRNATarget
XM_015762405.1	ncRNA:24   UGAACGUACAAACACCCCACUAUA   1   ||||||||||||||||*||||||| targets:864   ACUUGCAUGUUUGUGGAGUGAUAU   887 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group disease resistance RPP13-like protein 4 (LOC4327629), transcript variant X2, mRNA	disease resistance RPP13-like protein 4(LOC4327629)	coding protein	psRNATarget
AK070412.1	ncRNA:24   UGAACGUACAAACACCCCACUAUA   1   **||||||||||||||*||||||| targets:221   UAUUGCAUGUUUGUGGAGUGAUAU   244 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023054E23, full insert sequence	NA	coding protein	psRNATarget
AK288928.1	ncRNA:24   UGAACGUACAAACACCCCACUAUA   1   *|||*|||||||||||*||||||| targets:4417   CCUUACAUGUUUGUGGAGUGAUAU   4440 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090082F16, full insert sequence	NA	coding protein	psRNATarget
AK072337.1	ncRNA:24   UGAACGUACAAACACCCCACUAUA   1   |||-|=||||||||||*||||||| targets:1649   ACU-GUAUGUUUGUGGAGUGAUAU   1671 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023043H01, full insert sequence	NA	coding protein	psRNATarget
AK287908.1	ncRNA:24   UGAACGUACAAACACCCCACUAUA   1   **|||||*||||||*||||||||| targets:1580   UAUUGCACGUUUGUAGGGUGAUAU   1603 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065212K06, full insert sequence	NA	coding protein	psRNATarget
XM_015767317.1	ncRNA:24   UG-AACGUACAAACACCCCACUAUA   1   ||-||*=||||||||||*||||||| targets:1776   ACAUUAUAUGUUUGUGGAGUGAUAU   1800 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group ent-isokaurene C2-hydroxylase-like (LOC4328543), mRNA	ent-isokaurene C2-hydroxylase-like(LOC4328543)	coding protein	psRNATarget
AK243342.1	ncRNA:24   UG-AACGUACAAACACCCCACUAUA   1   ||-||*=||||||||||*||||||| targets:1669   ACAUUAUAUGUUUGUGGAGUGAUAU   1693 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J100059N12, full insert sequence	NA	coding protein	psRNATarget