ncRNA ID | novel_osa_miR911 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:26028303-26028509 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1742991;SRR1742993;SRR2040389;SRR1738214;SRR1738216 |
Length | 24 |
Mature sequence(if miRNA) | 184 - UGGCACCUACGUGUUAGUUGGACC - 207 |
Stem-loop(if miRNA) |
--    A             U     C           --     GAAAA        UUAAA      -AU           GCUACC     UUUUUUUAAAUAUAA   UGGC CCUACGUGUUAGU GGACC ACAUGUCAAUC  ACGUA     AAAUAAAA     GAAAAC   AUUUUCUCCUC      UUAGA               U   |||| ||||||||||||| ||||| |||||||||||  |||||     ||||||||     ||||||   |||||||||||      |||||   ACCG GGAUGUACAAUCA UCUGG UGUACAGUUAG  UGUAU     UUUAUUUU     UUUUUG   UAAAAGAGGAG      AAUCU               U CC    C             C     A           GA     ----A        --CAC      GUU           --AAUC     CUCCUUUCUUCUAUU |
Stem-loop sequence | UGGCACCUACGUGUUAGUUGGACCCACAUGUCAAUCACGUAGAAAAAAAUAAAAUUAAAGAAAACAUAUUUUCUCCUCGCUACCUUAGAUUUUUUUAAAUAUAAUUUUAUCUUCUUUCCUCUCUAACUAAGAGGAGAAAAUUUGGUUUUUCACUUUUAUUUAUAUGUAGGAUUGACAUGUAGGUCUCACUAACAUGUAGGCGCCACC |