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BaseInfo

ncRNA ID	novel_osa_miR909
Species	Oryza sativa
Class	miRNA
Genome position	Chr4:28314275-28314392 [-]
Reference genome	IRGSP-1.0
Source	SRR1742991;SRR2857735
Length	24
Mature sequence(if miRNA)	95 - UCGUGAGACAAAUCUUUUGAGCCU - 118
Stem-loop(if miRNA)	--         A                         G      CAU   U  U   -  A   UCGUGAGAC AAUCUUUUGAGCCUAAUUAGUUCAU AUUAGC   ACG AC ACA GU A   ||||||||| ||||||||||||||||||||||||| ||||||   ||| || ||| || C   GGCGCUCUG UUAGAAAACUCGGAUUAAUUAGGUA UAAUUG   UGU UG UGU CA C UU         C                         G      ---   U  -   A  C
Stem-loop sequence	UCGUGAGACAAAUCUUUUGAGCCUAAUUAGUUCAUGAUUAGCCAUACGUACUACAGUAACCCACAUGUGUUUGUGUUAAUGAUGGAUUAAUUAGGCUCAAAAGAUUCGUCUCGCGGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
CT831729.1	ncRNA:24   UCCGAGUUUUCUAAACAGAGUGCU   1   |||||||||||||||||||||||= targets:455   AGGCUCAAAAGAUUUGUCUCACGG   478 Target Full Sequence	1.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA117A02, full insert sequence	NA	coding protein	psRNATarget
AK069221.1	ncRNA:24   UCCGAGUUUUCUAAACAGAGUGCU   1   |||||||||=||||||||||||*| targets:604   AGGCUCAAAGGAUUUGUCUCACAA   627 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023018E21, full insert sequence	NA	coding protein	psRNATarget
XM_015791223.1	ncRNA:24   UCCGAGUUUUCUAAACAGAGUGCU   1   |||||||||=||||||||||||*| targets:1762   AGGCUCAAAGGAUUUGUCUCACAA   1785 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At1g01970 (LOC4344187), transcript variant X1, mRNA	pentatricopeptide repeat-containing protein At1g01970(LOC4344187)	coding protein	psRNATarget
XM_015781196.1	ncRNA:24   UCCGAGUUUUCUAAACAGAGUGCU   1   ||*||=||||||||||||||=||| targets:2153   AGACUUAAAAGAUUUGUCUCGCGA   2176 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group GATA transcription factor 6 (LOC4336532), mRNA	GATA transcription factor 6(LOC4336532)	coding protein	psRNATarget
AK068143.1	ncRNA:24   UCCGAGUUUUCUAAACAGAGUGCU   1   ||*=||||||||||||||||||*| targets:1231   AGAUUCAAAAGAUUUGUCUCACAA   1254 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013134C06, full insert sequence	NA	coding protein	psRNATarget