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BaseInfo

ncRNA ID	novel_osa_miR908
Species	Oryza sativa
Class	miRNA
Genome position	Chr4:34657339-34657450 [+]
Reference genome	IRGSP-1.0
Source	SRR1742991
Length	24
Mature sequence(if miRNA)	1 - CCGCAAGACGAAUCUUUUGAGCCU - 24
Stem-loop(if miRNA)	--C   A                C     UAA     C      AUA       UAC    CGC AGACGAAUCUUUUGAG CUAAU   UCCGU AUUAGU   UGUGGGU   U    ||| |||||||||||||||| |||||   ||||| ||||||   |||||||   G    GCG UCUGCUUAGAAAACUC GAUUA   AGGUA UAAUCG   ACAUUCA   U UUA   C                A     UUC     C      ---       CGA
Stem-loop sequence	CCGCAAGACGAAUCUUUUGAGCCUAAUUAAUCCGUCAUUAGUAUAUGUGGGUUACUGUAGCACUUACAGCUAAUCAUGGACUUAUUAGACUCAAAAGAUUCGUCUCGCGAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK103318.1	ncRNA:24   UCCGAGUUUUCUAAGCAGAACGCC   1   |||||||||||||||||||*|||* targets:1155   AGGCUCAAAAGAUUCGUCUCGCGA   1178 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033125I08, full insert sequence	NA	coding protein	psRNATarget
AK288948.1	ncRNA:24   UCCGAGUUUUCUAAGCAGAACGCC   1   ||||||||*||||||||||||||* targets:2734   AGGCUCAAUAGAUUCGUCUUGCGA   2757 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090083I09, full insert sequence	NA	coding protein	psRNATarget
XM_015761412.1	ncRNA:24   UCCGAGUUUUCUAAGCAGAACGCC   1   |||||||||||||||||||*|||* targets:633   AGGCUCAAAAGAUUCGUCUCGCGA   656 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group nucleobase-ascorbate transporter 2 (LOC4325616), mRNA	nucleobase-ascorbate transporter 2(LOC4325616)	coding protein	psRNATarget
AK067512.1	ncRNA:24   UCCGAGUUUUCUAAGCAGAACGCC   1   |||||||||||||||||||*|||* targets:1189   AGGCUCAAAAGAUUCGUCUCGCGA   1212 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013109G08, full insert sequence	NA	coding protein	psRNATarget
AK063539.1	ncRNA:24   UCCGAGUUUUCUAAGCAGAACGCC   1   ||||*||||||||*|||||||||| targets:2103   AGGCCCAAAAGAUCCGUCUUGCGG   2126 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:001-117-C04, full insert sequence	NA	coding protein	psRNATarget
CT831461.1	ncRNA:24   UCCGAGUUUUCUAAGCAGAACGCC   1   ||*||=|||||||||||||*|||| targets:436   AGUCUUAAAAGAUUCGUCUCGCGG   459 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA110A21, full insert sequence	NA	coding protein	psRNATarget
AK103177.1	ncRNA:24   UCCGAGUUUUCUAAGCAGAACGCC   1   ||*||||||||||||||||*|||* targets:1319   AGACUCAAAAGAUUCGUCUCGCGA   1342 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033121H17, full insert sequence	NA	coding protein	psRNATarget
XM_015788312.1	ncRNA:24   UCCGAGUUUUCUAAGCAGAACGCC   1   ||*||||||||||||||||*|||* targets:1675   AGACUCAAAAGAUUCGUCUCGCGA   1698 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group serine/arginine-rich splicing factor SR45a (LOC4342102), transcript variant X1, mRNA	serine/arginine-rich splicing factor SR45a(LOC4342102)	coding protein	psRNATarget
AK287827.1	ncRNA:24   UCCGAGUUUUCUAAGCAGAACGCC   1   ||*||||||||||||||||*|||* targets:2076   AGACUCAAAAGAUUCGUCUCGCGA   2099 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065185G19, full insert sequence	NA	coding protein	psRNATarget
AK073850.1	ncRNA:24   UCCGAGUUUUCUAAGCAGAACGCC   1   ||*||||||||||||||||*|||* targets:1658   AGACUCAAAAGAUUCGUCUCGCGA   1681 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033073F11, full insert sequence	NA	coding protein	psRNATarget
AK288279.1	ncRNA:24   UCCGAGUUUUCUAAGCAGAACGCC   1   |||--||||||||||||||||||* targets:5698   AGG--CAAAAGAUUCGUCUUGCGA   5719 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090017N13, full insert sequence	NA	coding protein	psRNATarget
AK288820.1	ncRNA:24   UCCGAGUUUUCUAAGCAGAACGCC   1   ||*|*||||||||||||||*|||* targets:3104   AGACACAAAAGAUUCGUCUCGCGA   3127 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090073D04, full insert sequence	NA	coding protein	psRNATarget