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BaseInfo

ncRNA ID	novel_osa_miR902
Species	Oryza sativa
Class	miRNA
Genome position	Chr4:2913849-2913996 [-]
Reference genome	IRGSP-1.0
Source	SRR1742991;SRR2040382;SRR2040394;SRR2040395;SRR2040399
Length	24
Mature sequence(if miRNA)	1 - ACCUCGAGAUACUUUUUAUUGGAC - 24
Stem-loop(if miRNA)	--    C     -         A      ------ G    C   AU        U         C      G  AA   CUAA AAAAA UAUCUCGAG UACUGG      A GGUA CAA  CGUUUCCG UCGUUGGAU UAACGG AU  G   |||| ||||| ||||||||| ||||||      | |||| |||  |||||||| ||||||||| |||||| ||  A   GGUU UUUUU AUAGAGCUC AUGGCC      U CCAU GUU  GCAAAGGC AGCAACCUA AUUGUU UG  U CA    A     C         C      AUAUAG G    A   GC        U         U      A  GG
Stem-loop sequence	CUAACAAAAAUAUCUCGAGAUACUGGAGGGUACCAAAUCGUUUCCGUUCGUUGGAUCUAACGGGAUAAGAUGGGUAUUGUUAUAUCCAACGAUCGGAAACGCGUUGAUACCGUGAUAUACCGGUACCUCGAGAUACUUUUUAUUGGAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015779655.1	ncRNA:24   CAGGUUAUUUUUCAUAGAGCUCCA   1   |||||||||||||||||||||||| targets:1464   GUCCAAUAAAAAGUAUCUCGAGGU   1487 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107280684 (LOC107280684), transcript variant X1, mRNA	uncharacterized LOC107280684(LOC107280684)	coding protein	psRNATarget
HI404119.1	ncRNA:24   CAGGUUAUUUUUCAUAGAGCUCCA   1   |||=||*|=||||||||||||||| targets:11   GUCUAACAGAAAGUAUCUCGAGGU   34 Target Full Sequence	2.0	Sequence 2244 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236249.1	ncRNA:24   CAGGUUAUUUUUCAUAGAGCUCCA   1   |||=||*|=||||||||||||||| targets:11   GUCUAACAGAAAGUAUCUCGAGGU   34 Target Full Sequence	2.0	Sequence 2244 from Patent EP2985353	NA	coding protein	psRNATarget
JB164580.1	ncRNA:24   CAGGUUAUUUUUCAUAGAGCUCCA   1   |||=||*|=||||||||||||||| targets:11   GUCUAACAGAAAGUAUCUCGAGGU   34 Target Full Sequence	2.0	Sequence 2244 from Patent EP2559767	NA	coding protein	psRNATarget
JB163994.1	ncRNA:24   CAGGUUAUUUUUCAUAGAGCUCCA   1   ||||||*||||||||*|||||||| targets:10   GUCCAACAAAAAGUACCUCGAGGU   33 Target Full Sequence	2.5	Sequence 1658 from Patent EP2559767	NA	coding protein	psRNATarget
HI403533.1	ncRNA:24   CAGGUUAUUUUUCAUAGAGCUCCA   1   ||||||*||||||||*|||||||| targets:10   GUCCAACAAAAAGUACCUCGAGGU   33 Target Full Sequence	2.5	Sequence 1658 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235663.1	ncRNA:24   CAGGUUAUUUUUCAUAGAGCUCCA   1   ||||||*||||||||*|||||||| targets:10   GUCCAACAAAAAGUACCUCGAGGU   33 Target Full Sequence	2.5	Sequence 1658 from Patent EP2985353	NA	coding protein	psRNATarget
HI404538.1	ncRNA:24   CAGGUUAUUUUUCAUAGAGCUCCA   1   ||||||*|||||*||||||||||| targets:11   GUCCAACAAAAAAUAUCUCGAGGU   34 Target Full Sequence	2.5	Sequence 2663 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236668.1	ncRNA:24   CAGGUUAUUUUUCAUAGAGCUCCA   1   ||||||*|||||*||||||||||| targets:11   GUCCAACAAAAAAUAUCUCGAGGU   34 Target Full Sequence	2.5	Sequence 2663 from Patent EP2985353	NA	coding protein	psRNATarget
JB164999.1	ncRNA:24   CAGGUUAUUUUUCAUAGAGCUCCA   1   ||||||*|||||*||||||||||| targets:11   GUCCAACAAAAAAUAUCUCGAGGU   34 Target Full Sequence	2.5	Sequence 2663 from Patent EP2559767	NA	coding protein	psRNATarget
XM_015786123.1	ncRNA:24   CAGGUUAUUUUUCAUAGAGCUCCA   1   ||||||*||||||||*|||||||| targets:620   GUCCAACAAAAAGUAACUCGAGGU   643 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4340617 (LOC4340617), mRNA	uncharacterized LOC4340617(LOC4340617)	coding protein	psRNATarget
AK287529.1	ncRNA:24   CAGGUUAUUUUUCAUAGAGCUCCA   1   ||||||*||||||||*|||||||| targets:131   GUCCAACAAAAAGUAACUCGAGGU   154 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065001C03, full insert sequence	NA	coding protein	psRNATarget
AK240791.1	ncRNA:24   CAGGUUAUUUUUCAUAGAGCUCCA   1   ||||||*||||||||*|||||||| targets:131   GUCCAACAAAAAGUAACUCGAGGU   154 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065001C03, full insert sequence	NA	coding protein	psRNATarget
XM_015790062.1	ncRNA:24   CAGGUUAUUUUUCAUAGAGCUCCA   1   ||=|||*||||||||||*|||||| targets:2278   GUUCAACAAAAAGUAUCCCGAGGU   2301 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group L-type lectin-domain containing receptor kinase IV.1 (LOC9268564), mRNA	L-type lectin-domain containing receptor kinase IV.1(LOC9268564)	coding protein	psRNATarget