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BaseInfo

ncRNA ID	novel_osa_miR899
Species	Oryza sativa
Class	miRNA
Genome position	Chr3:4638066-4638173 [+]
Reference genome	IRGSP-1.0
Source	SRR1742991
Length	21
Mature sequence(if miRNA)	1 - ACGAGAUGGAUCUUUUGAGCC - 21
Stem-loop(if miRNA)	--A          C    G  C        U    G    A UAUAA      CA    CGAGAUGGAU UUUU AG CUAAUUAG CCAU AUUA C     GUGUUA  G    |||||||||| |||| || |||||||| |||| |||| |     ||||||  U    GCUCUGCUUA AAGA UC GAUUAAUU GGUA UAAU G     UACAAU  A GGC          U    A  A        C    G    C ---UG      CA
Stem-loop sequence	ACGAGAUGGAUCUUUUGAGCCUAAUUAGUCCAUGAUUAACUAUAAGUGUUACAGUAACUAACAUGUGCUAAUGAUGGCUUAAUUAGACUAAGAAUAUUCGUCUCGCGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK072341.1	ncRNA:21   CCGAGUUUUCUAGGUAGAGCA   1   ||||=|||||||=|||||||| targets:2390   GGCUUAAAAGAUUCAUCUCGU   2410 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023052M08, full insert sequence	NA	coding protein	psRNATarget
AK120219.1	ncRNA:21   CCGAGUUUUCUAGGUAGAGCA   1   ||||||||||||=|||||||* targets:613   GGCUCAAAAGAUUCAUCUCGC   633 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013041B17, full insert sequence	NA	coding protein	psRNATarget
AK241322.1	ncRNA:21   CCGAGUUUUCUAGGUAGAGCA   1   ||||||||||||=|||||||* targets:2143   GGCUCAAAAGAUUCAUCUCGC   2163 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065142K05, full insert sequence	NA	coding protein	psRNATarget
XM_015757506.1	ncRNA:21   CCGAGUUUUCUAGGUAGAGCA   1   ||||||||||||=|||||||* targets:2136   GGCUCAAAAGAUUCAUCUCGC   2156 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9268466 (LOC9268466), transcript variant X1, mRNA	uncharacterized LOC9268466(LOC9268466)	coding protein	psRNATarget