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BaseInfo

ncRNA ID	novel_osa_miR893
Species	Oryza sativa
Class	miRNA
Genome position	Chr3:477295-477391 [+]
Reference genome	IRGSP-1.0
Source	SRR1742991
Length	21
Mature sequence(if miRNA)	77 - UUAGGCUUAGAAGAUUCAUCU - 97
Stem-loop(if miRNA)	--ACAAAAUUA          UUAA     -UA       A   -U   U            UUAAGCCUAA    UCUAU   UUAGCAA UGU  UGU G            ||||||||||    |||||   ||||||| |||  |||            GAUUCGGAUU    AGGUA   AAUUGUU ACA  ACG U UCUACUUAGAA          CACG     CUA       -   CC   A
Stem-loop sequence	ACAAAAUUAUUAAGCCUAAUUAAUCUAUUAUUAGCAAAUGUUUGUUGUAGCACCACAUUGUUAAAUCAUGGAGCACUUAGGCUUAGAAGAUUCAUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK103332.1	ncRNA:21   UCUACUUAGAAGAUUCGGAUU   1   |||||||||||=||||||||| targets:954   AGAUGAAUCUUUUAAGCCUAA   974 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J033125N22, full insert sequence	NA	coding protein	psRNATarget
AK099913.1	ncRNA:21   UCUACUUAGAAGAUUCGGAUU   1   |||||||||||=||||||||| targets:710   AGAUGAAUCUUUUAAGCCUAA   730 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013116E13, full insert sequence	NA	coding protein	psRNATarget
CT837782.1	ncRNA:21   UCUACUUAGAAGAUUCGGAUU   1   |||||||||||=||||||||| targets:757   AGAUGAAUCUUUUAAGCCUAA   777 Target Full Sequence	1.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA244J06, full insert sequence	NA	coding protein	psRNATarget
AK288192.1	ncRNA:21   UCUACUUAGAAGAUUCGGAUU   1   |||||||||||=||||||||| targets:1852   AGAUGAAUCUUUUAAGCCUAA   1872 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090007C12, full insert sequence	NA	coding protein	psRNATarget
AK064922.1	ncRNA:21   UCUACUUAGAAGAUUCGGAUU   1   |||||||||||=||||||||| targets:1953   AGAUGAAUCUUUUAAGCCUAA   1973 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013000N12, full insert sequence	NA	coding protein	psRNATarget
AK288422.1	ncRNA:21   UCUACUUAGAAGAUUCGGAUU   1   |||*|||||||=||||||||| targets:623   AGACGAAUCUUUUAAGCCUAA   643 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090032F09, full insert sequence	NA	coding protein	psRNATarget
AK288184.1	ncRNA:21   UCUACUUAGAAGAUUCGGAUU   1   |||*|||||||=||||||||| targets:874   AGACGAAUCUUUUAAGCCUAA   894 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090005P17, full insert sequence	NA	coding protein	psRNATarget
CT828685.1	ncRNA:21   UCUACUUAGAAGAUUCGGAUU   1   |||*|||||||=||||||||| targets:805   AGACGAAUCUUUUAAGCCUAA   825 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA124K24, full insert sequence	NA	coding protein	psRNATarget
AK288167.1	ncRNA:21   UCUACUUAGAAGAUUCGGAUU   1   |||*|||||||=||||||||| targets:1169   AGACGAAUCUUUUAAGCCUAA   1189 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090002K22, full insert sequence	NA	coding protein	psRNATarget
AK119775.1	ncRNA:21   UCUACUUAGAAGAUUCGGAUU   1   |||*|||||||=||||||||| targets:755   AGACGAAUCUUUUAAGCCUAA   775 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-172-G07, full insert sequence	NA	coding protein	psRNATarget
AK243163.1	ncRNA:21   UCUACUUAGAAGAUUCGGAUU   1   |||*|||||||=||||||||| targets:213   AGACGAAUCUUUUAAGCCUAA   233 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J100034L01, full insert sequence	NA	coding protein	psRNATarget
AK288995.1	ncRNA:21   UCUACUUAGAAGAUUCGGAUU   1   |||*|||||||=||||||||| targets:1074   AGACGAAUCUUUUAAGCCUAA   1094 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090088A20, full insert sequence	NA	coding protein	psRNATarget
AK288471.1	ncRNA:21   UCUACUUAGAAGAUUCGGAUU   1   |||*|||||||=||||||||| targets:1690   AGACGAAUCUUUUAAGCCUAA   1710 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090037K14, full insert sequence	NA	coding protein	psRNATarget
XM_015775745.1	ncRNA:21   UCUACUUAGAAGAUUCGGAUU   1   |||*|||||||=||||||||| targets:269   AGACGAAUCUUUUAAGCCUAA   289 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group transcription factor BHLH148 (LOC4334060), mRNA	transcription factor BHLH148(LOC4334060)	coding protein	psRNATarget
AK288436.1	ncRNA:21   UCUACUUAGAAGAUUCGGAUU   1   |||*|||||||=||||||||| targets:5411   AGACGAAUCUUUUAAGCCUAA   5431 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090033P03, full insert sequence	NA	coding protein	psRNATarget