Search result

BaseInfo

ncRNA ID novel_osa_miR880
Species Oryza sativa
Class miRNA
Genome position Chr1:19822968-19823082 [+]
Reference genome IRGSP-1.0
Source SRR1742991
Length 21
Mature sequence(if miRNA) 95 - UUAUCGGAUAAAGAAAUGACC - 115
Stem-loop(if miRNA) --         C          UG   -A                   AA  U    A
  UCAUUUCUU AUUCGGUAAA  GAU  GUAACAUUGUUCAUAAAAU  AC AUAU A
  ||||||||| ||||||||||  |||  |||||||||||||||||||  || |||| G
  AGUAAAGAA UAGGCUAUUU  CUA  CAUUGUAACAAGUGUUUUA  UG UAUA A
CC         A          CG   AA                   CA  -    G
Stem-loop sequence UCAUUUCUUCAUUCGGUAAAUGGAUAGUAACAUUGUUCAUAAAAUAAACUAUAUAAGAGAUAUGUACAUUUUGUGAACAAUGUUACAAAUCGCUUUAUCGGAUAAAGAAAUGACC