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BaseInfo

ncRNA ID	novel_osa_miR870
Species	Oryza sativa
Class	miRNA
Genome position	Chr6:7563458-7563674 [-]
Reference genome	IRGSP-1.0
Source	SRR1555746;SRR1556014
Length	21
Mature sequence(if miRNA)	197 - UAAAGGAAGUUGUUUAGGACA - 217
Stem-loop(if miRNA)	--               A     A  UUUA    AAA    AGGAA   AAAUCAUGAAUAAUUCUCAAGUUGUUAAGUUUAAAAAUGUAAAAAUUAUAUGAAUAGAUUUGU   UAAAGGAAGUUGUUU GGACA UG    AGUC   CCUU     UAU                                                               C   ||||||||||||||| ||||| ||    ||||   ||||     |||                                                               U   AUUUCUUUUAGCAAA CUUGU GC    UCAG   AGAU     UUU                                                               U GC               A     C  UGUG    ---    -----   GUGUUGAAAUUUAAGAAACUGAGGAACAAAGAUAUAUACAUAUGAAAAUACUUUCAUAAAAAG
Stem-loop sequence	UAAAGGAAGUUGUUUAGGACAAUGUUUAAGUCAAACCUUAGGAAUAUAAAUCAUGAAUAAUUCUCAAGUUGUUAAGUUUAAAAAUGUAAAAAUUAUAUGAAUAGAUUUGUCUUGAAAAAUACUUUCAUAAAAGUAUACAUAUAUAGAAACAAGGAGUCAAAGAAUUUAAAGUUGUGUUUUAGAGACUGUGUCGCUGUUCAAAACGAUUUUCUUUACG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015775297.1	ncRNA:21   ACAGGAUUUGUUGAAGGAAAU   1   ||||||||||=|||||||||| targets:1777   UGUCCUAAACGACUUCCUUUA   1797 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group aminotransferase ALD1 homolog (LOC4331930), mRNA	aminotransferase ALD1 homolog(LOC4331930)	coding protein	psRNATarget
AK288994.1	ncRNA:21   ACAGGAUUUGUUGAAGGAAAU   1   ||||||||||=|||||||||| targets:1729   UGUCCUAAACGACUUCCUUUA   1749 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090087P03, full insert sequence	NA	coding protein	psRNATarget
AK288987.1	ncRNA:21   ACAGGAUUUGUUGAAGGAAAU   1   |*||||||||=|||||||||| targets:1323   UAUCCUAAACGACUUCCUUUA   1343 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090086J09, full insert sequence	NA	coding protein	psRNATarget
XM_015770513.1	ncRNA:21   ACAGGAUUUGUUGAAGGAAAU   1   |*||=|||||=|||||||||| targets:74   UAUCUUAAACGACUUCCUUUA   94 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group cysteine-rich receptor-like protein kinase 10 (LOC4328709), transcript variant X13, mRNA	cysteine-rich receptor-like protein kinase 10(LOC4328709)	coding protein	psRNATarget