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BaseInfo

ncRNA ID novel_osa_miR868
Species Oryza sativa
Class miRNA
Genome position Chr12:160511-160591 [-]
Reference genome IRGSP-1.0
Source SRR1742991;SRR2857731;SRR2857732
Length 24
Mature sequence(if miRNA) 1 - CACGGCACGGCUACUGUAGCGGGC - 24
Stem-loop(if miRNA) -- G  -  G                 ----   G    U   
  C GC AC AGUAGCCGUGCCGUGCU    UGG CCGC GGCC
  | || || |||||||||||||||||    ||| |||| |||G
  G CG UG UCAUCGGCACGGCACGG    GCC GGCG CCGA
CG G  A  -                 CACG   G    C   
Stem-loop sequence CGGCACGAGUAGCCGUGCCGUGCUUGGGCCGCUGGCCGAGCCCGCGGGCCGGCACGGCACGGCACGGCUACUGUAGCGGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015775977.1
ncRNA:24   CGGGCGAUGUCAUCGGCACGGCAC   1
  |=||||||||||||||||||||**
targets:927   GUCCGCUACAGUAGCCGUGCCGGC   950

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107280456 (LOC107280456), mRNA uncharacterized LOC107280456(LOC107280456) coding protein psRNATarget