| ncRNA ID | novel_osa_miR858 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr11:23997511-23997685 [-] |
| Reference genome | IRGSP-1.0 |
| Source | SRR1742991;SRR1743000;SRR3234044;SRR1738223 |
| Length | 24 |
| Mature sequence(if miRNA) | 152 - GAUUUUUUGACAAACGUUUGACCU - 175 |
| Stem-loop(if miRNA) |
-- U A C U AAA A U -UU - UG A UUUAU GAUUUU UGAC AACGUUUGA C UUCGUCUUAUUCAAA UUUAU UAA UAUAA UAUUU UAU UG CUUGA CAUC |||||| |||| ||||||||| | ||||||||||||||| ||||| ||| ||||| ||||| ||| || ||||| |||A CUGAAA AUUG UUGCAAACU G GAGCAGAAUAAGUUU AAAUA GUU AUAUU AUGAA AUA AC GGAUU GUAA AA U G A U AAA C U UUU U GU - -UCUU |
| Stem-loop sequence | GAUUUUUUGACAAACGUUUGACCUUUCGUCUUAUUCAAAAAAUUUAUAUAAUUAUAAUUUAUUUUAUUGUGACUUGAUUUAUCAUCAAAUGUUCUUUAGGCAUGAUAUAAGUAUUUUUAUAUUUGCAUAAAAAAUUUGAAUAAGACGAGUGAUCAAACGUUGGUUAUAAAGUCAA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CT835080.1 |
|
1.5 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN071I07, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| AK288703.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090061G13, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| AK288262.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090016B02, full insert sequence | NA | coding protein | psRNATarget |