ncRNA ID | novel_osa_miR853 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr6:12369210-12369324 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1555746;SRR1555747;SRR2097778;SRR2097779;SRR2098557;SRR2098560;SRR2098822;SRR2099745;SRR1556014;SRR4407775;SRR4407777;SRR4407779;SRR4407953;SRR4407955;SRR4407956;SRR4407957;SRR4407958;SRR4407959;SRR4407960;SRR4407961;SRR4407962;SRR1556020 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUGUUACUAUUACUUUGUCGGAU - 24 |
Stem-loop(if miRNA) |
--         CG   UA          C       A     A      A       U   CCGACAAAG  AAU  UAACAUUGUU ACAAAAU UACAU UCUCUU UAUAGUU A   |||||||||  |||  |||||||||| ||||||| ||||| |||||| |||||||   GGCUGUUUC  UUA  AUUGUAAUAA UGUUUUA AUGUA AGAGAG AUAUCAA U UA         -A   UC          A       A     G      A       A |
Stem-loop sequence | CCGACAAAGCGAAUUAUAACAUUGUUCACAAAAUAUACAUAUCUCUUAUAUAGUUUAUAAACUAUAAGAGAGAGAUGUAAAUUUUGUAAAUAAUGUUACUAUUACUUUGUCGGAU |