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BaseInfo

ncRNA ID ahy-miR398
Species Arachis hypogaea
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 20
Mature sequence(if miRNA) NA - UGUGUUCUCAGGUCACCCCU - NA
Stem-loop(if miRNA) UAU        A    A             A        --U       -UU  GAA       AUC   U      U   U
   CUCAGAGG GUGA CCUGAGAACACAA GUAAAUUG   UUCGGAG   UG   UGCCAUA   ACA GCAUAA GCA U
   |||||||| |||| ||||||||||||| ||||||||   |||||||   ||   |||||||   ||| |||||| |||
   GAGUUUCC CACU GGACUCUUGUGUU CAUUUAAU   AAGCUUU   AC   AUGGUAU   UGU CGUAUU CGU U
---        C    -             C        UUU       UAU  ---       --A   U      -   A
Stem-loop sequence UAUCUCAGAGGAGUGAACCUGAGAACACAAAGUAAAUUGUUUCGGAGUUUGGAAUGCCAUAAUCACAUGCAUAAUGCAUUUAUGCUUAUGCUUGUAUAUGGUACAUAUUUUCGAAUUUUAAUUUACCUUGUGUUCUCAGGUCACCCCUUUGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ756402.1
ncRNA:20   UCCCCACUGGACUCUUGUGU   1
  |||||*||||||||||||||
targets:389   AGGGGCGACCUGAGAACACA   408

1.0 TSA: Arachis hypogaea CL4369Contig1.Arhy mRNA sequence NA coding protein psRNATarget

Reference

1 PMID:20047695
"Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)";
Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ;
BMC Plant Biol. 10:3(2010).