ncRNA ID | ahy-miR398 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 20 |
Mature sequence(if miRNA) | NA - UGUGUUCUCAGGUCACCCCU - NA |
Stem-loop(if miRNA) |
UAU        A    A             A        --U       -UU  GAA       AUC   U      U   U    CUCAGAGG GUGA CCUGAGAACACAA GUAAAUUG   UUCGGAG   UG   UGCCAUA   ACA GCAUAA GCA U    |||||||| |||| ||||||||||||| ||||||||   |||||||   ||   |||||||   ||| |||||| |||    GAGUUUCC CACU GGACUCUUGUGUU CAUUUAAU   AAGCUUU   AC   AUGGUAU   UGU CGUAUU CGU U ---        C    -             C        UUU       UAU  ---       --A   U      -   A |
Stem-loop sequence | UAUCUCAGAGGAGUGAACCUGAGAACACAAAGUAAAUUGUUUCGGAGUUUGGAAUGCCAUAAUCACAUGCAUAAUGCAUUUAUGCUUAUGCUUGUAUAUGGUACAUAUUUUCGAAUUUUAAUUUACCUUGUGUUCUCAGGUCACCCCUUUGAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ756402.1 |
|
1.0 | TSA: Arachis hypogaea CL4369Contig1.Arhy mRNA sequence | NA | coding protein | psRNATarget |
1 | PMID:20047695
"Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)"; Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ; BMC Plant Biol. 10:3(2010). |